Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20spinifera_20[genbank_20GCA_5F001599535.1_202016-03-01] 38 sequences; 32,702,796 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq5 114 2e-20 >seq5 Length=2876130 Score = 114 bits (126), Expect = 2e-20 Identities = 336/511 (66%), Gaps = 10/511 (2%) Strand=Plus/Plus Query 96876 CAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGAC 96935 ||||| ||||| || || || || ||| | ||| ||||| | || || |||||||| || Sbjct 2651984 CAGGGTGGCAACAAGCGCCCCGGTGCTTTTGCCATCTACCTTGAGCCCTGGCACGCTGAT 2652043 Query 96936 GTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGAC 96995 ||||||||||| | | || | || || ||| ||||| | || ||| | || Sbjct 2652044 GTTTTTGACTTCTTGAACCTGAGAAAGAATCACGGCAAAGAAGAAGTCCGTGCCCGTGAT 2652103 Query 96996 TTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTC---AACGACGGTGGC 97052 |||| ||||| |||||| || || ||||||||| |||||| || || | Sbjct 2652104 CTGTTCTATGCTCTCTGGACTCCTGACCTGTTCATGAGCCGCGTCGAGAAGAACCAAG-- 2652161 Query 97053 TACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGAG 97112 |||||| ||| | ||||| | | |||| ||||| | ||| || ||||| ||| Sbjct 2652162 -ACTGGACCCTCTTCTGCCCTCATGAGGCACCGGGTCTTGCTGATGTCTATGGCGAGGAG 2652220 Query 97113 TTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCG-ATACGTGAGACGAGTCGATGC 97171 |||||||| ||| | || || | ||||| || || |||| | || | || Sbjct 2652221 TTTGAGGCTCTCTACGAGCGATATGAAAAGGAGGGACGTGGTCGCCAGACCA-TCAAGGC 2652279 Query 97172 ACGAGAACTGTGGAAGGCCA-TCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTC 97230 | || ||||| | || | || ||| || || ||||| || |||||||| || | Sbjct 2652280 TCAGAAATTGTGGTATGCTATTCTTGA-AGCACAAACCGAGACCGGTACTCCGTATATGC 2652338 Query 97231 TCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGGCT 97290 | ||||||||| | || || |||||||| || |||| || || | ||| Sbjct 2652339 TTTACAAGGATGCATGCAACAAGAAGAGCAACCAGAAGAACCTGGGGACAATTCGGAGCT 2652398 Query 97291 CCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGCAGTTTGCGTTC 97350 | ||||| ||||| ||||| || |||||| | | || |||||| || || ||| || Sbjct 2652399 CAAATCTTTGCACCGAAATCGTCGAGTACACTGCGCCAGACGAGGTTGCTGTCTGCAATC 2652458 Query 97351 TGGCATCGGTCAATCTGCCCAAGTTTGTAGA 97381 | || ||| | ||||| | ||||| || Sbjct 2652459 TTGCTTCGCTGGCCCTGCCGACCTTTGTCGA 2652489 Score = 84.2 bits (92), Expect = 3e-11 Identities = 173/253 (68%), Gaps = 16/253 (6%) Strand=Plus/Plus Query 97991 TGGGTCCATTCAAAACATTACCATCATCCCGGAAGAGTT----GCGCAGAATCTACAAGA 98046 ||| || ||||| |||||| ||| |||||||| || | || | ||||||||| Sbjct 2653114 TGGTTCGATTCAGAACATTCCCAACATCCCGGCCGACCTCAAGGCTC----TCTACAAGA 2653169 Query 98047 CTGTCTGGGAGAT---TCCGACCAAGACGCTGATCGATATGGCTGCCGACAGAGGTGTCT 98103 |||||||||| || || | ||| | || | |||||||||||| | |||| | Sbjct 2653170 CTGTCTGGGAAATCAGTCAGCGCAATATTCTAC---AGATGGCTGCCGACCGTGGTGCTT 2653226 Query 98104 ACATTGACCAGAGTCAATCGTTCAATCTGTACGTTGCCGAGCCCACCTACAGTCGT-ATG 98162 |||||||||| |||||| |||| | || | ||||| || || | | || Sbjct 2653227 TCATTGACCAGTCTCAATCCCTCAACATTCACTTGAAGGAGCCAAC-TATGGGCAAGATC 2653285 Query 98163 ACTTCGATACACTTTTACGCATGGAACAAGGGCCTCAAGACGGGCATGTACTATCTGAGA 98222 || || || |||||| || ||||| | |||| | ||||| ||||||||||| || | Sbjct 2653286 ACATCCATGCACTTTGCCGGCTGGAAGATGGGCTTGAAGACTGGCATGTACTACCTCCGT 2653345 Query 98223 ACAAAGTCGGCCA 98235 |||| | | |||| Sbjct 2653346 ACAATGGCTGCCA 2653358 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741058847996880