Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20spinifera_20[genbank_20GCA_5F001599535.1_202016-03-01] 38 sequences; 32,702,796 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq5 150 3e-32 seq3 150 3e-32 >seq5 Length=2876130 Score = 150 bits (166), Expect = 3e-32 Identities = 134/165 (81%), Gaps = 2/165 (1%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||||||||||| || | ||| |||||| || ||||||||||| ||||||||||| || || Sbjct 675509 GCTAAGCGTCACCGAAAGAT-TCTTCGCGACAACATCCAAGGTATCACCAAGCCTGCCAT 675451 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||| ||||| |||||||||||||| ||||||||| |||| | || ||||||| |||| Sbjct 675450 CCGACGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATCTCCGCCATGATCTATGAGGAGAC 675391 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGC 16596 |||| ||| ||||||| |||||| || || |||| |||||| Sbjct 675390 CCGTGGTGTCTTGAAGACCTTCCTTGAGGGTGTCATCCGTGATGC 675346 >seq3 Length=3603273 Score = 150 bits (166), Expect = 3e-32 Identities = 159/207 (77%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||||||||||| || | ||| |||||| || |||||||| || ||||||||||| || || Sbjct 1408012 GCTAAGCGTCACCGAAAGAT-TCTTCGCGACAACATCCAGGGTATCACCAAGCCTGCCAT 1407954 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 | | ||||| |||||||||||||| ||||||||| |||||| || |||| ||||||| Sbjct 1407953 CAGACGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATCTCTGCCATGATCTACGAAGAGAC 1407894 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 ||| | ||| | ||| |||||| | | || || | ||| || || ||||||||| Sbjct 1407893 TCGCGGTGTCCTCAAGTCCTTCCTTGAATCAGTCATTCGTGACGCCGTCACCTATACCGA 1407834 Query 16612 GCACGCTAAACGTAAGACTGTCACCTC 16638 || || || | ||||| |||||||| Sbjct 1407833 ACATGCAAAGAGAAAGACCGTCACCTC 1407807 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79075165256334