Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20spinifera_20[genbank_20GCA_5F001599535.1_202016-03-01] 38 sequences; 32,702,796 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq3 98.7 1e-15 seq1 98.7 1e-15 >seq3 Length=3603273 Score = 98.7 bits (108), Expect = 1e-15 Identities = 113/152 (74%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 26805 ATCACCATCGAATTAGAATCAAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGAC 26864 |||||| | || | || ||| |||||||||||| | ||||| ||||| ||| Sbjct 2486759 ATCACCCTTGAGGTGGAGTCATCCGACACCATCGACAACGTCAAGTCCAAGATCCAAGAC 2486700 Query 26865 AAAGAAGGGATACCTCCCGATCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGAT 26924 || ||||| || |||||||||||||| || | |||| || ||| || |||||||| ||| Sbjct 2486699 AAGGAAGGAATCCCTCCCGATCAACAGCGATTGATTTTCGCCGGAAAGCAACTCGAGGAT 2486640 Query 26925 GATAGAAACGTCAGCGACTATAACATTCAAAA 26956 | ||| | | |||||||| ||||| ||||| Sbjct 2486639 GGCCGAACCCTGAGCGACTACAACATCCAAAA 2486608 >seq1 Length=5022262 Score = 98.7 bits (108), Expect = 1e-15 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | ||||| || || | || || || | |||||| | || | ||||| Sbjct 2612021 ATGCAAATCTTTGTCAAGACCCTCACCGGCAAGACCATCACCCTTGAGGTCGAATCTTCA 2612080 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||||||||| | || || |||||| || || || || || ||||| || ||| Sbjct 2612081 GACACCATCGACAACGTGAAGTCCAAGATTCAGGATAAGGAGGGCATTCCTCCTGACCAA 2612140 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 ||| | || || | || |||||| ||||||||||| | | | | || |||||| ||| Sbjct 2612141 CAACGTCTGATCTTCGCCGGCAAGCAACTCGAAGACGGCCGCACCCTCTCCGACTACAAC 2612200 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 || || |||||||| ||| |||| || || || Sbjct 2612201 ATCCAGAAAGAATCCACTCTCCACCTTGTTCT 2612232 Score = 98.7 bits (108), Expect = 1e-15 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | || || || || | || || ||| | ||||| ||||| | ||||| Sbjct 2612249 ATGCAGATCTTCGTCAAGACCCTTACGGGCAAAACTATCACACTCGAAGTTGAATCCTCA 2612308 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||| ||||| | || || |||||| ||||||||||| || || ||||| ||| Sbjct 2612309 GACACAATCGACAACGTAAAGAGCAAGATTCAAGACAAAGAAGGCATCCCACCCGACCAA 2612368 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 ||| || | || | | || || ||| | ||||||| |||| || || || ||| Sbjct 2612369 CAACGATTGATCTTTGCAGGAAAGCAATTGGAAGATGGCAGAACTCTCTCAGATTACAAC 2612428 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 || ||||||||||| || | ||||| ||| ||||||| |||| || Sbjct 2612429 ATCCAAAAAGAATCCACGCTACATCTCGTCTTGAGACTGCGAGGTGG 2612475 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478662172635360