Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20spinifera_20[genbank_20GCA_5F001599535.1_202016-03-01] 38 sequences; 32,702,796 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq3 107 2e-18 seq1 104 2e-17 >seq3 Length=3603273 Score = 107 bits (118), Expect = 2e-18 Identities = 115/152 (76%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 24027 ATTACCATCGAAGTCGAGGCCAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGAC 24086 || ||| | || || ||| | |||||||||||| | ||||| ||||| ||| Sbjct 2486759 ATCACCCTTGAGGTGGAGTCATCCGACACCATCGACAACGTCAAGTCCAAGATCCAAGAC 2486700 Query 24087 AAAGAAGGCATACCTCCCGATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGAT 24146 || ||||| || ||||||||||||||| || |||||| || ||| ||||||||||| ||| Sbjct 2486699 AAGGAAGGAATCCCTCCCGATCAACAGCGATTGATTTTCGCCGGAAAGCAACTCGAGGAT 2486640 Query 24147 GACAGAAACGTCAGCGATTATAACATTCAAAA 24178 | | ||| | | ||||| || ||||| ||||| Sbjct 2486639 GGCCGAACCCTGAGCGACTACAACATCCAAAA 2486608 >seq1 Length=5022262 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | || || || || | || || ||| | || || ||||||| || || Sbjct 2612249 ATGCAGATCTTCGTCAAGACCCTTACGGGCAAAACTATCACACTCGAAGTTGAATCCTCA 2612308 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||| ||||| | || || |||||| |||||||||||||| || ||||| ||| Sbjct 2612309 GACACAATCGACAACGTAAAGAGCAAGATTCAAGACAAAGAAGGCATCCCACCCGACCAA 2612368 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 || || |||| | | || |||||| | ||||||| ||||| || ||||| ||| Sbjct 2612369 CAACGATTGATCTTTGCAGGAAAGCAATTGGAAGATGGCAGAACTCTCTCAGATTACAAC 2612428 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 || ||||||||||| || | ||| | || || ||| || |||| || Sbjct 2612429 ATCCAAAAAGAATCCACGCTACATCTCGTCTTGAGACTGCGAGGTGG 2612475 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | ||||| || || | || || || | || ||| | || ||||| | Sbjct 2612021 ATGCAAATCTTTGTCAAGACCCTCACCGGCAAGACCATCACCCTTGAGGTCGAATCTTCA 2612080 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||||||||| | || || |||||| || || || ||||| ||||| || ||| Sbjct 2612081 GACACCATCGACAACGTGAAGTCCAAGATTCAGGATAAGGAGGGCATTCCTCCTGACCAA 2612140 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 || | ||||| | || |||||||||||||||||| | | | | | || ||| || ||| Sbjct 2612141 CAACGTCTGATCTTCGCCGGCAAGCAACTCGAAGACGGCCGCACCCTCTCCGACTACAAC 2612200 Query 24171 ATTCAAAAAGAATCTAC 24187 || || |||||||| || Sbjct 2612201 ATCCAGAAAGAATCCAC 2612217 Score = 89.7 bits (98), Expect = 4e-13 Identities = 127/179 (71%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 24009 ACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAACGACACCATCGAGCAAGTC 24068 ||| | || || || | || ||| | || ||||| ||| ||| |||||||| | ||| Sbjct 2611811 ACAGTCACCGGCAAGACCATCACCCTTGAGGTCGAATCCAGCGATACCATCGACAACGTC 2611870 Query 24069 AAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAACAGAGACTGATTTACGGC 24128 || ||||| ||||| |||||||| || |||||||||||| | || || | || Sbjct 2611871 AAGTCCAAGATCCAGGACAAGGAAGGCATTCCCCCCGATCAACAGCGCCTCATCTTCGCT 2611930 Query 24129 GGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAACATTCAAAAAGAATCTAC 24187 || ||||| || ||||||| | | | | ||||| || |||||||| || || || || Sbjct 2611931 GGTAAGCAGCTTGAAGATGGCCGCACTCTGAGCGACTACAACATTCAGAAGGAGTCGAC 2611989 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429935800885890