Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20spinifera_20[genbank_20GCA_5F001599535.1_202016-03-01] 38 sequences; 32,702,796 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq1 134 1e-26 seq2 87.8 2e-12 seq3 84.2 2e-11 >seq1 Length=5022262 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || ||| | || || || ||| | ||| | ||||| || | | Sbjct 2612477 ATGCAGATCTTTGTCAAGACTCTGACGGGCAAGACGATTACTTTGGAAGTCGAGTCATCT 2612536 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||||| | ||| | ||||| || || ||||||||||||||||| || || |||||| Sbjct 2612537 GATACCATTGACAACGTCAAATCGAAGATCCAAGACAAGGAGGGTATCCCCCCGGATCAA 2612596 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || | || ||||| ||||| ||||| |||||| ||| ||| | || || |||||| Sbjct 2612597 CAGCGATTGATCTTTGCAGGCAAGCAGTTGGAGGATGGCCGTACCCTGTCTGACTACAAC 2612656 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 || ||||| ||| ||| | ||||| || ||| || | || || || Sbjct 2612657 ATCCAAAAGGAAAGCACTCTCCATTTGGTGTTGAGACTTCGTGGCGG 2612703 Score = 131 bits (144), Expect = 1e-25 Identities = 147/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| ||||| || || | ||||| || || |||| ||||| || ||| | | Sbjct 2612021 ATGCAAATCTTTGTCAAGACCCTCACCGGCAAGACCATCACCCTTGAGGTCGAATCTTCA 2612080 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| | | || || ||||| || |||||||| ||||| || || ||| Sbjct 2612081 GACACCATCGACAACGTGAAGTCCAAGATTCAGGATAAGGAGGGCATTCCTCCTGACCAA 2612140 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 |||||||| || || |||||||| || | || || ||||||| ||||||| |||||| Sbjct 2612141 CAACGTCTGATCTTCGCCGGCAAGCAACTCGAAGACGGCCGCACCCTCTCCGACTACAAC 2612200 Query 22399 ATTCAAAAAGAATCCAC 22415 || || ||||||||||| Sbjct 2612201 ATCCAGAAAGAATCCAC 2612217 Score = 125 bits (138), Expect = 6e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | || || ||||| |||| || ||||| ||| || | Sbjct 2612249 ATGCAGATCTTCGTCAAGACCCTTACGGGCAAAACTATCACACTCGAAGTTGAATCCTCA 2612308 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| | | || || ||||||||||| || || || |||||||| ||| Sbjct 2612309 GACACAATCGACAACGTAAAGAGCAAGATTCAAGACAAAGAAGGCATCCCACCCGACCAA 2612368 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||||| | || ||||| || || || || || ||| | | || |||| ||||||||| Sbjct 2612369 CAACGATTGATCTTTGCAGGAAAGCAATTGGAAGATGGCAGAACTCTCTCAGATTACAAC 2612428 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 || |||||||||||||| ||||| | || ||| || |||| || || Sbjct 2612429 ATCCAAAAAGAATCCACGCTACATCTCGTCTTGAGACTGCGAGGTGG 2612475 Score = 107 bits (118), Expect = 2e-18 Identities = 146/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302 ||||| || || |||| ||||| || ||| ||| ||||||| | ||| | |||| Sbjct 2611817 ACCGGCAAGACCATCACCCTTGAGGTCGAATCCAGCGATACCATCGACAACGTCAAGTCC 2611876 Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || || || |||||||| || ||||| ||||||||||| || || || || || || || Sbjct 2611877 AAGATCCAGGACAAGGAAGGCATTCCCCCCGATCAACAGCGCCTCATCTTCGCTGGTAAG 2611936 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACAT 22422 ||| | || ||| |||||| | ||| ||||||||||| || || || ||| | || Sbjct 2611937 CAGCTTGAAGATGGCCGCACTCTGAGCGACTACAACATTCAGAAGGAGTCGACCTTGCAC 2611996 Query 22423 TTAGTTTTGCGATTGCGCGGAGGT 22446 || ||| | || | || || ||| Sbjct 2611997 TTGGTTCTTCGTCTTCGTGGCGGT 2612020 >seq2 Length=4816724 Score = 87.8 bits (96), Expect = 2e-12 Identities = 83/106 (78%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 22311 AGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGA 22370 ||||||||| || ||||| || || ||||||||||| || || |||||||| || | || Sbjct 234512 AGACAAGGAAGGAATTCCTCCTGACCAACAACGTCTGATCTTCGCCGGCAAGCAACTCGA 234571 Query 22371 GGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACC 22416 ||| |||||| | ||||| ||||||||||| || || || ||| Sbjct 234572 AGATGGCCGCACTCTTTCCGACTACAACATTCAGAAGGAGTCGACC 234617 >seq3 Length=3603273 Score = 84.2 bits (92), Expect = 2e-11 Identities = 117/164 (71%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302 || || || || |||| ||||| ||||| | |||| ||| | ||| | |||| Sbjct 2486771 ACGGGCAAGACCATCACCCTTGAGGTGGAGTCATCCGACACCATCGACAACGTCAAGTCC 2486712 Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || || ||||||||||| || || || ||||||||||| || | || || ||||| || Sbjct 2486711 AAGATCCAAGACAAGGAAGGAATCCCTCCCGATCAACAGCGATTGATTTTCGCCGGAAAG 2486652 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAA 22406 || | |||||| ||| ||| | ||| |||||||| ||||| Sbjct 2486651 CAACTCGAGGATGGCCGAACCCTGAGCGACTACAACATCCAAAA 2486608 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419727805613470