Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20spinifera_20[genbank_20GCA_5F001599535.1_202016-03-01] 38 sequences; 32,702,796 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq1 138 1e-27 seq2 86.0 5e-12 >seq1 Length=5022262 Score = 138 bits (152), Expect = 1e-27 Identities = 154/206 (75%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||||||||| || | | ||| || || | || || || || ||||||||||| ||| Sbjct 2612022 ATACCGCCACGAAGACGAAGAACCAAGTGCAAGGTCGACTCCTTCTGAATGTTGTAGTCG 2611963 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 |||| ||| || ||||||||| || ||||||||| ||||||| |||||||| || || Sbjct 2611962 CTCAGAGTGCGGCCATCTTCAAGCTGCTTACCAGCGAAGATGAGGCGCTGTTGATCGGGG 2611903 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||||||||| ||||| ||||| || | | || | ||| ||| |||||||| Sbjct 2611902 GGAATGCCTTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTATCGCTGGATTCG 2611843 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGT 114358 || || | ||| | || |||||||| Sbjct 2611842 ACCTCAAGGGTGATGGTCTTGCCGGT 2611817 Score = 122 bits (134), Expect = 7e-23 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 || || || || |||||||| || | ||||| ||| ||||||||||| ||||||||||| Sbjct 2612478 ATGCCACCTCGCAGTCTCAAGACGAGATGTAGCGTGGATTCTTTTTGGATGTTGTAATCT 2612419 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | ||| | |||||| | ||| || || || |||| | || |||||||| || Sbjct 2612418 GAGAGAGTTCTGCCATCTTCCAATTGCTTTCCTGCAAAGATCAATCGTTGTTGGTCGGGT 2612359 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || |||||||||||||| |||||| |||| | || | ||||| | |||||| Sbjct 2612358 GGGATGCCTTCTTTGTCTTGAATCTTGCTCTTTACGTTGTCGATTGTGTCTGAGGATTCA 2612299 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | || | |||||||| || || || || || || |||||||| Sbjct 2612298 ACTTCGAGTGTGATAGTTTTGCCCGTAAGGGTCTTGACGAAGATCTGCAT 2612249 Score = 113 bits (124), Expect = 4e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || | | ||| | || | || |||||||| || |||||||| ||| Sbjct 2612250 ATACCACCACGGAGCCGGAGAACAAGGTGGAGAGTGGATTCTTTCTGGATGTTGTAGTCG 2612191 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | || || ||||| ||||| || || ||| |||| ||||| |||||||| ||| Sbjct 2612190 GAGAGGGTGCGGCCGTCTTCGAGTTGCTTGCCGGCGAAGATCAGACGTTGTTGGTCAGGA 2612131 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 |||||||| || || || |||||| || | | || | |||||| | |||||| Sbjct 2612130 GGAATGCCCTCCTTATCCTGAATCTTGGACTTCACGTTGTCGATGGTGTCTGAAGATTCG 2612071 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | ||| | || |||||||| || || || ||||| || ||||| Sbjct 2612070 ACCTCAAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACAAAGATTTGCAT 2612021 >seq2 Length=4816724 Score = 86.0 bits (94), Expect = 5e-12 Identities = 100/135 (74%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 114155 ACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCT 114214 ||| ||||| |||| | || | || | || || || || ||||||||||| ||| Sbjct 234647 ACCACCACGGAGTCGGAGGACGAGGTGGAGGGTCGACTCCTTCTGAATGTTGTAGTCGGA 234588 Query 114215 CATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGG 114274 | ||| || |||||| ||||| || || ||| |||| ||||| |||||||| ||||| Sbjct 234587 AAGAGTGCGGCCATCTTCGAGTTGCTTGCCGGCGAAGATCAGACGTTGTTGGTCAGGAGG 234528 Query 114275 AATGCCTTCTTTGTC 114289 ||| ||||| ||||| Sbjct 234527 AATTCCTTCCTTGTC 234513 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420134205425256