Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20spinifera_20[genbank_20GCA_5F001599535.1_202016-03-01] 38 sequences; 32,702,796 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq5 168 1e-36 seq2 89.7 1e-12 >seq5 Length=2876130 Score = 168 bits (186), Expect = 1e-36 Identities = 739/1150 (64%), Gaps = 36/1150 (3%) Strand=Plus/Minus Query 244300 CCACATGTCAAACTGCAGCAGCCCCTTGCTGACGGGGCTGCCCTCGTAGGTCGGGTAGGG 244359 |||||| ||| | || || | || | | ||| || |||||||| || ||| | || || Sbjct 2652838 CCACATATCATATTGAAGGACGCCTTGGGAGACTGGACTGCCCTCATATGTCTGATAAGG 2652779 Query 244360 ACCGTCGCGCTGGGCCAGCTTACA----GCTCTCGTCGAGGGCGGCGTAGTAGATGGTCT 244415 || | || ||| |||| || ||| || | |||||||| |||||||||| Sbjct 2652778 GCCTTGCTCCTTGGCGAGCTCGCATGAGGCTGTC----AAGGCGGCGTGATAGATGGTCT 2652723 Query 244416 CGAAGATCATCTTGTTCATGTCGCGGGCCTTGCCGCAGGTGAAGGGGATGCCCATCATCA 244475 |||||||| |||| | | ||||| || | || || || || | | | || Sbjct 2652722 CGAAGATCTGGATGTTGAGCTGTCGGGC-TTCCGGCGAGTCAAAAGGCAGACGAAGGGCA 2652664 Query 244476 TGAAGA-CGTCGGCCAGTCCCTGCACGCCGATGCCGATGGGTCTGTGTCGCTTGTTGGAG 244534 | | | | || ||||| || || || |||| || || |||| ||||||| ||||| | Sbjct 2652663 AGGAAAGCATCTGCCAGACCTTGTACACCGAGACCAATTGGTCGGTGTCGCATGTTGCTG 2652604 Query 244535 CGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCGATCACCTTGTTGAGGTTGCGGGTG 244594 | |||| ||||| || || || ||||| |||||| | ||||| | |||||||||| Sbjct 2652603 TTCTTGGCCTCGGGAACAGGATAGTAGTTGATGTCGATAATTTTGTTCAAGTTGCGGGTG 2652544 Query 244595 ATCA--TGCGGACGACGTCGGCCAGCAGCTGAAAGTCGTACTCGTAGGGATCCTCGGCGA 244652 | | || | | || ||| || | ||||| || || || ||| Sbjct 2652543 ACGACTTGAGTA--ACCTCGTGGAGACGACCGAAGTCATATTCA-------CCGCGGGCT 2652493 Query 244653 TGGTGATCCTCACAAACTCGTTGAGGGCGACGCTGGCCAGGTTGCAGACGGCCACCTCCT 244712 |||| | || || ||| ||||| | || || |||||||| || ||||| | Sbjct 2652492 TGGT---CGACA-AAGGTCGGC-AGGGCCAGCGAAGCAAGATTGCAGACAGCAACCTCGT 2652438 Query 244713 CCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTACTGCACTTGATGGTGCCCAGGT 244772 | | ||||||| ||| || |||||||| || || || | || || ||||||| Sbjct 2652437 CTGGCGCAGTGTACTCGACGATTTCGGTGCAAAGATTTGAGCTCCGAATTGTCCCCAGGT 2652378 Query 244773 GCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAGAGCATGAAGGGCCCCCCGGTCT 244832 || || ||| ||| |||||| || |||||||| ||||| | || ||||||| Sbjct 2652377 TCTTCTGGTTGCTCTTCTTGTTGCATGCATCCTTGTAAAGCATATACGGAGTACCGGTCT 2652318 Query 244833 CGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCCCTAGCCTTGACCGTCCTGCGAGCCT 244892 || || || | || | | ||| | | | |||||||| ||| |||| | Sbjct 2652317 CGGTTTGTGCTTCAAGAATAGCATACCACAATTTCTGAGCCTTGATGGTCTGGCGACCAC 2652258 Query 244893 TGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCGAACTCGGGGCCCCAGACCTCGTCTA 244952 ||||| || || || ||| || ||||| ||||| ||| |||| || | | Sbjct 2652257 GTCCCTCCTTTTCATATCGCTCGTAGAGAGCCTCAAACTCCTCGCCATAGACATCAGCAA 2652198 Query 244953 GGCCGGG-GCACGACGCCGGGCACATGAGACTCCACTCGCCGCCGTCCTTGACCCTCTGC 245011 | || || || | | ||||| | ||| |||| || | | || ||| | | Sbjct 2652197 GACCCGGTGCCTCATGA-GGGCAGAAGAGGGTCCAGTCTTGGTTCTTCTCGACGCGGCTC 2652139 Query 245012 ATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCCTGGTCCTCTGCTCGTCCGAG 245071 ||||| ||||| || ||||||| || | ||| || || | || | || || | Sbjct 2652138 ATGAACAGGTCAGGAGTCCAGAGAGCATAGAACAGATCACGGGCACGGACTTCTTCTTTG 2652079 Query 245072 CCAGTG-TTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGACGTGCCAGGGCTCCATGTA 245130 || ||| ||||| ||||| | ||| |||||||| || || ||||||||||||| | ||| Sbjct 2652078 CC-GTGATTCTTTCTCAGGTTCAAGAAGTCAAAAACATCAGCGTGCCAGGGCTCAAGGTA 2652020 Query 245131 GACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTCCACCATCCTCTCGAGCG-CGT 245189 || || | || ||||| ||||||||||| ||||||| || ||| || | || Sbjct 2652019 GATGGCAAAAGCACCGGGGCGCTTGTTGCCACCCTGGT-CAACATAGCGGGCAGTGTTGT 2651961 Query 245190 TGAAGATGCGCAGGGTAGGCACTATGCCGTTAGAGTGGCCGTTGGTGCCCTTGATGTAGG 245249 |||||| || || | || | | ||| || || ||| || ||||| ||||| | Sbjct 2651960 TGAAGACACGAAGCATGGGGATGAGGCCATTCGACGTGCCATTAGTGCCGGCAATGTATG 2651901 Query 245250 CGCCCTTGCCCCTGAGGTTGCTGATGGA--CATGCCTAGTCCGCCGGCGTGCTTGGAGAT 245307 ||| || | | | | | ||| | | || || | ||||| || ||||||||| Sbjct 2651900 AGCCGGTGGCACGAATGCAG-TGA-GCATTCAAACCGATACCGCCAGCAGTCTTGGAGAT 2651843 Query 245308 GAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCCTCCATGCTGTCCGACTTCATGTTGAG 245367 | || || |||| | || || || ||||| |||||||| |||||||||| || Sbjct 2651842 CATAGCACAAGTCTTCAGCGTATCGTAGATACCCTCAATGCTGTCGGACTTCATGTCGAT 2651783 Query 245368 CAGAAAGCAGGAGGACAGCTGGGGCTTGGGGCTGCACGAGTTGAACAGAGTGGGGCTGGC 245427 ||| ||||| || ||||| || || | || | | | |||||||| || || ||| Sbjct 2651782 CAGGAAGCATGACGACAGTTGAGGTTGAGGTGTTCCGGCGTTGAACAAGGTTGGCGAGGC 2651723 Query 245428 GTGGGTAAAG 245437 || || ||| Sbjct 2651722 ATGAGTGAAG 2651713 >seq2 Length=4816724 Score = 89.7 bits (98), Expect = 1e-12 Identities = 118/164 (72%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 42610 TGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAACT 42669 ||||| | || || || || || || ||||| |||||||| |||||||| | | | Sbjct 3365668 TGTTCGATGCTATTGACACCATCCCTTGCATTCGCAAGAAGGCCGACTGGGCATTGAGAT 3365727 Query 42670 GGATCGAGAGTCCCGACGCAACGTTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGG 42729 ||||| | || | || ||||| | | || || || || |||| ||||||| Sbjct 3365728 GGATCTCCGATGAAGAATCGACCTTCGGTCAACGACTTGTCGCTTTCGCCGCAGTCGAGG 3365787 Query 42730 GCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAG 42773 | ||||||||||| ||| | ||||| |||||||||||||||||| Sbjct 3365788 GAATCTTCTTCTCCGGCTCATTCGCTTCCATCTTCTGGCTCAAG 3365831 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944338751438880