Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20spinifera_20[genbank_20GCA_5F001599535.1_202016-03-01] 38 sequences; 32,702,796 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq1 104 2e-17 seq2 84.2 2e-11 >seq1 Length=5022262 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276 || || |||| ||| | || ||||| | ||| ||||||||||| ||||||||||||| | Sbjct 2612475 CCACCTCGCAGTCTCAAGACGAGATGTAGCGTGGATTCTTTTTGGATGTTGTAATCTGAG 2612416 Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336 | || | | ||||| | ||||| || ||| | || | || || |||||||| || Sbjct 2612415 AGAGTTCTGCCATCTTCCAATTGCTTTCCTGCAAAGATCAATCGTTGTTGGTCGGGTGGG 2612356 Query 64337 ATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACT 64396 || |||||||| ||||| || || |||||| || | ||| || || || ||| Sbjct 2612355 ATGCCTTCTTTGTCTTGAATCTTGCTCTTTACGTTGTCGATTGTGTCTGAGGATTCAACT 2612296 Query 64397 TCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || | || | || ||||| || | || || ||||| || ||||| Sbjct 2612295 TCGAGTGTGATAGTTTTGCCCGTAAGGGTCTTGACGAAGATCTGCAT 2612249 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || |||||||| || |||||||| || | || |||||| ||||||| || ||||||||| Sbjct 2612217 GTGGATTCTTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCTTCGAGTTGCTTGCCG 2612158 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 || | || || || || ||||| |||||||| || || || || || || || ||| Sbjct 2612157 GCGAAGATCAGACGTTGTTGGTCAGGAGGAATGCCCTCCTTATCCTGAATCTTGGACTTC 2612098 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 || || | || || | || || || | || | |||||||||||| | || Sbjct 2612097 ACGTTGTCGATGGTGTCTGAAGATTCGACCTCAAGGGTGATGGTCTTGCCGGTGAGGGTC 2612038 Query 64427 TTTACGAAAATTTGCAT 64443 || || || |||||||| Sbjct 2612037 TTGACAAAGATTTGCAT 2612021 Score = 89.7 bits (98), Expect = 5e-13 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 |||||| || | | ||| || | || | ||||| || || ||||||||||| || Sbjct 2612020 ACCGCCACGAAGACGAAGAACCAAGTGCAAGGTCGACTCCTTCTGAATGTTGTAGTCGCT 2611961 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | ||||| | |||||||||||||| || || | ||||| ||||| || ||||| || Sbjct 2611960 CAGAGTGCGGCCATCTTCAAGCTGCTTACCAGCGAAGATGAGGCGCTGTTGATCGGGGGG 2611901 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 ||| ||||| || || || || || ||| || || | ||||| | || || || Sbjct 2611900 AATGCCTTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTATCGCTGGATTCGAC 2611841 Query 64396 TTCTACAGTTACGGTCTTGCCGGT 64419 || | || | |||||||||||| Sbjct 2611840 CTCAAGGGTGATGGTCTTGCCGGT 2611817 >seq2 Length=4816724 Score = 84.2 bits (92), Expect = 2e-11 Identities = 100/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || || | || || || || || | ||||| || || ||||||||||| || | Sbjct 234647 ACCACCACGGAGTCGGAGGACGAGGTGGAGGGTCGACTCCTTCTGAATGTTGTAGTCGGA 234588 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | ||||| | ||||| || ||||||||||| | || || || || ||||| ||||| Sbjct 234587 AAGAGTGCGGCCATCTTCGAGTTGCTTGCCGGCGAAGATCAGACGTTGTTGGTCAGGAGG 234528 Query 64336 AATTCCTTCTTTTTCT 64351 ||||||||| || ||| Sbjct 234527 AATTCCTTCCTTGTCT 234512 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499644562668720