Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20spinifera_20[genbank_20GCA_5F001599535.1_202016-03-01] 38 sequences; 32,702,796 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq5 226 3e-54 >seq5 Length=2876130 Score = 226 bits (250), Expect = 3e-54 Identities = 610/922 (66%), Gaps = 16/922 (2%) Strand=Plus/Plus Query 93715 AATTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGC 93774 || ||| | || |||| |||||| || |||| | || || || || ||||| |||| Sbjct 2651546 AACTACAACTATTTTGGCTTCAAGACGTTGGAAAGATCATATCTGCTGAAGAT---TGGC 2651602 Query 93775 AGG---GTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGC 93831 | | ||| | |||||||| || || |||| ||||| ||| | | || || ||||| Sbjct 2651603 AAGCAAGTTGCTGAGCGACCACAACACATGCTCATGCGTGTCTCTGTGGGCATCCACGGT 2651662 Query 93832 CACGACATGCCGA--ATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATAC-C 93888 | || || ||| | || | | | | | |||| | ||| | | || | Sbjct 2651663 GATGA--TGTCGATAAGGTGCTTGAGACGTACCACCTCATGTCTCAGAAGTGCTTCACTC 2651720 Query 93889 ATGGCCACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTC 93948 ||| || | || ||| |||||||||| || || || || || |||| || || ||| Sbjct 2651721 ATG-CCTCGCCAACCTTGTTCAACGCCGGAACACCTCAACCTCAACTGTCGTCATGCTTC 2651779 Query 93949 CTGAT-GACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGC 94007 ||||| ||| | ||| ||||| ||| || || | ||| | || ||| ||||| Sbjct 2651780 CTGATCGAC-ATGAAGTCCGACAGCATTGAGGGTATCTACGATACGCTGAAGACTTGTGC 2651838 Query 94008 GACCATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGG 94067 | ||||| || || || || ||||| | | || ||| | | ||||||| || Sbjct 2651839 TATGATCTCCAAGACTGCTGGCGGTATCGGTTTGAATGCTCACTGCATTCGTGCCACCGG 2651898 Query 94068 TTCCTACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTT 94127 || ||||| ||| || |||||||| || || |||||| |||| ||||| || ||||| Sbjct 2651899 CTCATACATTGCCGGCACTAATGGCACGTCGAATGGCCTCATCCCCATGCTTCGTGTCTT 2651958 Query 94128 CAACAACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGT 94187 ||||||| | || ||||| || ||||||||||| | | | ||| |||| || | Sbjct 2651959 CAACAACACTGCCCGCTATGTTGACCAGGGTGGCAACAAGCGCCCCGGTGCTTTTGCCAT 2652018 Query 94188 CTATCTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGG 94247 ||| || |||||||||||||| || || | ||| | ||||| ||||||| ||||| Sbjct 2652019 CTACCTTGAGCCCTGGCACGCTGATGTTTTTGACTTCTTGAACCTGAGAAAGAATCACGG 2652078 Query 94248 CAACGATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTAT 94307 ||| || | | ||| | || || ||||| ||||||||| || ||||| || || Sbjct 2652079 CAAAGAAGAAGTCCGTGCCCGTGATCTGTTCTATGCTCTCTGGACTCCTGACCTGTTCAT 2652138 Query 94308 GAAACGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACT 94367 || ||||||||||| ||| | ||||| || || || || |||| || || || Sbjct 2652139 GAGCCGCGTCGAGAAGAACCAAGACTGGACCCTCTTCTGCCCTCATGAGGCACCGGGTCT 2652198 Query 94368 GTCCGACGTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGG-CA 94426 | || || | ||| | ||||| | | || | || || ||| | |||| | Sbjct 2652199 TGCTGATGTCTATGGCGAGGAGTTTGAGGCTCTCTACGAGCGATATGAAAAGGAGGGACG 2652258 Query 94427 AGGCCAGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGG 94486 || | | || || | ||| ||| ||||| || || | || | ||| | Sbjct 2652259 TGGTC-GCCAGACCATCAAGGCTCAGAAATTGTGGTATGCTATTCTTGAAGCACAAACCG 2652317 Query 94487 AGACGGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGC 94546 |||| ||||| || || || | | |||||| | |||| ||| ||||||| || Sbjct 2652318 AGACCGGTACTCCGTATATGCTTTACAAGGATGCATGCAACAAGAAGAGCAACCAGAAGA 2652377 Query 94547 ACCTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGG 94606 |||| ||| || |||||| ||||| |||||||| || |||||||| ||| | || | Sbjct 2652378 ACCTGGGGACAATTCGGAGCTCAAATCTTTGCACCGAAATCGTCGAGTACACTGCGCCAG 2652437 Query 94607 ACGAGATTGCTGTGTGTAACCT 94628 ||||| ||||||| || || || Sbjct 2652438 ACGAGGTTGCTGTCTGCAATCT 2652459 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494722965006480