Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20spinifera_20[genbank_20GCA_5F001599535.1_202016-03-01] 38 sequences; 32,702,796 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq5 140 3e-28 seq1 91.5 1e-13 seq3 87.8 2e-12 seq2 84.2 2e-11 >seq5 Length=2876130 Score = 140 bits (154), Expect = 3e-28 Identities = 980/1546 (63%), Gaps = 57/1546 (4%) Strand=Plus/Minus Query 153030 TTGACCACTTGAAACTCGCCCGCCAACACTCGTCTCAAATATACATTGCTAGTGAAAGGT 153089 ||||| | ||| || ||||| ||||| || |||| | || | || ||| | || Sbjct 2653038 TTGACGATTTGGAATTCGCCAGCCAATACACGTCGAGAGTAGATGTTTGACGTGTATGGC 2652979 Query 153090 TCAAAGGATTCGTTATTGCCTAGTATTTGAGCCGTGGTTGCGGTCGGCATGTACGCCACC 153149 || ||| ||||||| || || | || |||| |||| ||| || |||||| || || Sbjct 2652978 TCGAAGCATTCGTTGTTACCCAAGATCTGAGATGTGGATGCAGTGGGCATGGGAGCAACA 2652919 Query 153150 AACAAAGAATTCCGCAAGCCGTGCGCTCGAATGTCGTCCTTCAACGCCTG--CCAATCCC 153207 | | ||| || || | || ||| | ||| || |||||| | ||| ||| |||| Sbjct 2652918 AGAAGAGAGTTGCGGACACCATGCTTTGCAATTTCAGCCTTCA--GGCTGTCCCAGTCCC 2652861 Query 153208 ACAGCGCCGACGGTGTCGCGTTCCACATGTCGTACTGTAACACTCCTCGACTGGCGGGAC 153267 |||| | | ||| || | |||||||| || || || | || ||| | | | |||| Sbjct 2652860 ACAGGTCTGTCGGAGTAACATTCCACATATCATATTGAAGGACGCCTTGGGAGACTGGAC 2652801 Query 153268 TGCCGGCAAACGTACTG-TAGCTGCCGT-CGCGTTGGGCCAGTTCGCAGCTAGCC-TCGA 153324 |||| || | || ||| || ||| | | | |||| | || ||||| || || | Sbjct 2652800 TGCCCTCATATGT-CTGATAAGGGCCTTGCTCCTTGG-CGAGCTCGCATGAGGCTGTCAA 2652743 Query 153325 GCGCGCCATAGTATATGGTTTCGGCGATTTGTTTATTGAGAA--CGGCCGCTTCTTCGCT 153382 | ||| | | || ||||| ||| ||| || | ||||| ||| ||||| Sbjct 2652742 G-GCGGCGTGATAGATGGTCTCGAAGATCTGGATGTTGAGCTGTCGG--GCTTCCGGCGA 2652686 Query 153383 CTCGTACGGCATGCGCAGCAGCACAAAGGCGTCGGCCAGACCCTGGATACCGACGCCGAT 153442 || | |||| || || | || || || |||||||| || | ||||| || || Sbjct 2652685 GTCAAAAGGCAGACGAAGGGCAAGGAAAGCATCTGCCAGACCTTGTACACCGAGACCAAT 2652626 Query 153443 GGGTCGATGCTTCTCGTTGCTGCGCCTCGCGCTCGCTATG-GGATAGTGATTGCGATCGA 153501 ||||| || | ||||||| | | || |||| | ||||||| ||| |||| Sbjct 2652625 TGGTCGGTGTCGCATGTTGCTGTTCTTGGC-CTCGGGAACAGGATAGTAGTTGATGTCGA 2652567 Query 153502 TAATTTTGTTGAGGTTGCGCACCACCACTTTAGTTATCGCCTTAAGTTTCTCGAAATCAT 153561 |||||||||| | |||||| || |||| ||| | | | | || |||| |||| Sbjct 2652566 TAATTTTGTTCAAGTTGCGGGTGACGACTTGAGTAACCTCGTGGAGACGACCGAAGTCAT 2652507 Query 153562 AGGTCAT-------TTCGTCGACGCGTACGCATCGATTCACGGCAATAGACGCCAGATTA 153614 | ||| || |||||| | | ||| || ||| | || || ||||| Sbjct 2652506 AT-TCACCGCGGGCTTGGTCGACAA--AGG--TCGG--CAGGGCCAGCGAAGCAAGATTG 2652454 Query 153615 CAGACGGCCGTCTCTTC-GGCGTCGCTGTACTGCACGATCTCGGCGCAGAGGTT---GCT 153670 ||||| || ||| || |||| | |||||| ||||| |||| ||| || || ||| Sbjct 2652453 CAGACAGCAACCTCGTCTGGCGCAG-TGTACTCGACGATTTCGGTGCAAAGATTTGAGCT 2652395 Query 153671 GCATTTTATGACGCCCAAATTTTGCTGATTGCTTTTGCGATTGCACGCGTCTTTGAAGAG 153730 | || | |||| || | ||| ||||| || ||||| || || ||| | || Sbjct 2652394 CCGAATTGTC---CCCAGGTTCTTCTGGTTGCTCTTCTTGTTGCATGCATCCTTGTAAAG 2652338 Query 153731 CATGTACGGTCCGCCGGTCTCGACTTGCGTTTCGACGATAAACCTATG-CAGGTCCTGCG 153789 ||| ||||| ||||||||| ||| | ||| | ||| | || || | ||| | Sbjct 2652337 CATATACGGAGTACCGGTCTCGGTTTGTGCTTCAAGAATAG-CATACCACAATTTCTGAG 2652279 Query 153790 CTCGCACCCGCTGCCGATAGCGGCCCTCGCTCTCGTATCGCTCGTACAGTCGCTCAAACT 153849 | | ||| ||| || ||||| | || ||||||||||| || |||||||| Sbjct 2652278 CCTTGATGGTCTGGCGACCACGTCCCTCCTTTTCATATCGCTCGTAGAGAGCCTCAAACT 2652219 Query 153850 CGTCGCCGTAGCAGTCGGCGAGGCCGGGACACTGATGCGGACACATCAGCGACCACATAT 153909 | ||||| ||| || || || || || || ||| || || | || | ||| | Sbjct 2652218 CCTCGCCATAGACATCAGCAAGACCCGGTGCCTCATGAGGGCAGAAGAGGGTCCAGTCTT 2652159 Query 153910 CGTCGGCGTTGACGCGTCGCATGAACAGATCCGGCACCCAGAGCGCGTACATGAGGTCGC 153969 || | |||||| | ||||||||| || || |||||| || || | || || | Sbjct 2652158 GGTTCTTCTCGACGCGGCTCATGAACAGGTCAGGAGTCCAGAGAGCATAGAACAGATCAC 2652099 Query 153970 GCGCCTTGCAATCCTCCGCGCCCATGTTGCGTT-TCAGATTGAGCACGCTATAGATGTCG 154028 | || | || || ||| || | | || |||| || | | | | | | || Sbjct 2652098 GGGCACGGACTTCTTCTTTGCCG-TGATTCTTTCTCAGGTTCAAGAAGTCAAAAACATCA 2652040 Query 154029 GCGTGCCAGGGTTCAATGTAGACGGCCAGGGCACCTTTACGCTTT---CCGCCCTGATCG 154085 ||||||||||| |||| ||||| ||| | ||||| ||||| || ||||| || Sbjct 2652039 GCGTGCCAGGGCTCAAGGTAGATGGCAAAAGCACCGGGGCGCTTGTTGCCACCCTGGTCA 2651980 Query 154086 ACGTGGCGCACCATATTGTTGAAGACGCGCACCATGGGTTCCAGGCCGCTTGCGGTGCCG 154145 || | ||| | | ||||||||||| || | |||||| ||||| | | ||||| Sbjct 2651979 ACATAGCGGGCAGTGTTGTTGAAGACACGAAGCATGGGGATGAGGCCATTCGACGTGCCA 2651920 Query 154146 TTGGT--CG--AATTGATCTTGCTGCCGCGGGCGCGCACTTGATGCACGTTAACGCCAAT 154201 || || || ||| || |||| ||| || | || | || | || || Sbjct 2651919 TTAGTGCCGGCAATGTATGA----GCCGGTGGCACGAATGCAGTGAGCATTCAAACCGAT 2651864 Query 154202 GCCGCC-GCCGTACTTTGATATGGCAGCGCA-GTCGCCCAGCGTCCTGTAGATGCCGTCG 154259 ||||| || || ||| || || ||| || ||| | ||||| |||||| || || Sbjct 2651863 ACCGCCAGCAGT-CTTGGAGATCATAGCACAAGTCTTC-AGCGTATCGTAGATACCCTCA 2651806 Query 154260 ATGCTATCGTCGCGGACGCCGAGCAAGAAACACGAACACATTTGCGGAATGCGCGTTCCC 154319 ||||| ||| | | ||| || ||| || || ||| ||| || | ||||| Sbjct 2651805 ATGCTGTCGGACTTCATGTCGATCAGGAAGCATGACGACAGTTGAGGTTGAGGTGTTCCG 2651746 Query 154320 GCCGAAAAGAGGGTGGGACTCGCGTGCGTAAACAGTTTTTGGCTCATCATGCGGTACGTT 154379 || || | ||| || || || || || || || ||| | | ||||||| Sbjct 2651745 GCGTTGAACAAGGTTGGCGAGGCATGAGTGAAGCACTTCTGAGACATGAGGTGGTACGTC 2651686 Query 154380 TCGATGGCGTCTTCGATATCATCGCCGTGAATGCCGAGCGCGACGCGCATGAGCATGTGC 154439 || | | | |||| |||||| ||||| ||||| | | ||| |||||||||||||| Sbjct 2651685 TCAAGCACCTTATCGACATCATCACCGTGGATGCCCACAGAGACACGCATGAGCATGTGT 2651626 Query 154440 TGCGGACGTTCGGCGACTCTATTGTCAATCTTCAAGAGATATCCATTTTCGAGGGTTTTG 154499 || || || || || ||| ||| ||||||||| |||||| |||| | || ||| Sbjct 2651625 TGTGGTCGCTCAGCAACTTGCTTGCCAATCTTCAGCAGATATGATCTTTCCAACGTCTTG 2651566 Query 154500 TAACCGAAATACTTGTATTCAAAATCTAGCTCATGAGCGATGGCCG 154545 | || ||||| ||||| | || ||| | || | ||||||||| Sbjct 2651565 AAGCCAAAATAGTTGTAGTTGAAGTCTCGGTCGTATACGATGGCCG 2651520 >seq1 Length=5022262 Score = 91.5 bits (100), Expect = 1e-13 Identities = 160/232 (69%), Gaps = 6/232 (3%) Strand=Plus/Minus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTA---TGTTTGACTCCTTTTGAATGTTGTAGTC 138443 |||||| || | | ||| || ||||| | || || |||||||| ||||||||||| Sbjct 2612704 GCCGCCACGAAGTCTCAACACCAAATGGAGAGTGCTT---TCCTTTTGGATGTTGTAGTC 2612648 Query 138444 GCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGG 138503 || ||||| ||||| | || || || | | |||| | |||||||| ||||| Sbjct 2612647 AGACAGGGTACGGCCATCCTCCAACTGCTTGCCTGCAAAGATCAATCGCTGTTGATCCGG 2612588 Query 138504 AGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTC 138563 || ||||| || ||||| ||| || ||| | | || | ||| || | ||||| Sbjct 2612587 GGGGATACCCTCCTTGTCTTGGATCTTCGATTTGACGTTGTCAATGGTATCAGATGACTC 2612528 Query 138564 CACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615 || || | || | ||| || || |||||||| || ||||| ||||||||| Sbjct 2612527 GACTTCCAAAGTAATCGTCTTGCCCGTCAGAGTCTTGACAAAGATCTGCATG 2612476 Score = 89.7 bits (98), Expect = 5e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 ||||| || | ||| | ||| || || | | | |||||||| |||||||||||||||||| Sbjct 2612019 CCGCCACGAAGACGAAGAACCAAGTGCAAGGTCGACTCCTTCTGAATGTTGTAGTCGCTC 2611960 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||| || || || || || ||||| | |||| || |||||||| || || || Sbjct 2611959 AGAGTGCGGCCATCTTCAAGCTGCTTACCAGCGAAGATGAGGCGCTGTTGATCGGGGGGA 2611900 Query 138508 ATACCTTCTTTGTC 138521 || ||||| ||||| Sbjct 2611899 ATGCCTTCCTTGTC 2611886 >seq3 Length=3603273 Score = 87.8 bits (96), Expect = 2e-12 Identities = 128/181 (71%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 138425 CCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGA 138484 ||||||| |||||||||||||||| || || ||||||||||| || |||| | | Sbjct 2486606 CCTTTTGGATGTTGTAGTCGCTCAGGGTTCGGCCATCCTCGAGTTGCTTTCCGGCGAAAA 2486665 Query 138485 TTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTT 138544 | | |||||||| || ||||| || ||||| ||||| ||| || || | | | Sbjct 2486666 TCAATCGCTGTTGATCGGGAGGGATTCCTTCCTTGTCTTGGATCTTGGACTTGACGTTGT 2486725 Query 138545 CCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAA 138604 | | |||||||| ||||||||||| | || | || || || || || || || || | Sbjct 2486726 CGATGGTGTCGGATGACTCCACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGA 2486785 Query 138605 A 138605 | Sbjct 2486786 A 2486786 >seq2 Length=4816724 Score = 84.2 bits (92), Expect = 2e-11 Identities = 79/101 (78%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| ||||||||||||||| | ||| || || |||||||| || |||| Sbjct 234613 GACTCCTTCTGAATGTTGTAGTCGGAAAGAGTGCGGCCATCTTCGAGTTGCTTGCCGGCG 234554 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTC 138521 |||| ||||| |||||||| ||||| || ||||| ||||| Sbjct 234553 AAGATCAGACGTTGTTGGTCAGGAGGAATTCCTTCCTTGTC 234513 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496262164275360