Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20spinifera_20[genbank_20GCA_5F001599535.1_202016-03-01] 38 sequences; 32,702,796 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq1 143 2e-29 >seq1 Length=5022262 Score = 143 bits (158), Expect = 2e-29 Identities = 172/231 (74%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || || || || ||||| || ||||| ||||| ||||| |||||||| || ||||| Sbjct 2612478 ATGCCACCTCGCAGTCTCAAGACGAGATGTAGCGTGGATTCTTTTTGGATGTTGTAATCT 2612419 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 || ||| | ||| |||||||| |||||||| | ||||||||||| ||||| || Sbjct 2612418 GAGAGAGTTCTGCCATCTTCCAATTGCTTTCCTGCAAAGATCAATCGTTGTTGGTCGGGT 2612359 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289 || ||||||||||| |||||||| || || | || | || | ||||| || || || Sbjct 2612358 GGGATGCCTTCTTTGTCTTGAATCTTGCTCTTTA-CGTTGTCGATTGTGTCTGAGGATTC 2612300 Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 |||||||| || | |||||||| || || || || || || || ||||| Sbjct 2612299 AACTTCGAGTGTGATAGTTTTGCCCGTAAGGGTCTTGACGAAGATCTGCAT 2612249 Score = 116 bits (128), Expect = 3e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTG 45173 || || || || |||||||| | ||| || || |||||||||||| || || || Sbjct 2612703 CCGCCACGAAGTCTCAACACCAAATGGAGAGTGCTTTCCTTTTGGATGTTGTAGTCAGAC 2612644 Query 45174 ACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGA 45233 | ||| ||| ||||| || || ||||| | |||||||| || || ||||| || Sbjct 2612643 AGGGTACGGCCATCCTCCAACTGCTTGCCTGCAAAGATCAATCGCTGTTGATCCGGGGGG 2612584 Query 45234 ATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGAC 45292 || || || || ||||| || || ||||| || | || | ||| || || |||||||| Sbjct 2612583 ATACCCTCCTTGTCTTGGATCTTCGATTTGA-CGTTGTCAATGGTATCAGATGACTCGAC 2612525 Query 45293 TTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||| | ||||| ||| ||||| || ||||| || ||||| || ||||| Sbjct 2612524 TTCCAAAGTAATCGTCTTGCCCGTCAGAGTCTTGACAAAGATCTGCAT 2612477 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 452002985298480