Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20spinifera_20[genbank_20GCA_5F001599535.1_202016-03-01] 38 sequences; 32,702,796 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq1 143 6e-29 seq2 113 1e-19 seq3 96.9 8e-15 >seq1 Length=5022262 Score = 143 bits (158), Expect = 6e-29 Identities = 157/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || |||||||||||||| || || || |||| ||||||||| | | || | || ||| Sbjct 2612232 AGAACAAGGTGGAGAGTGGATTCTTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCT 2612173 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || || ||||| ||||||||||| ||||| || ||||| ||| ||| || || ||| Sbjct 2612172 TCGAGTTGCTTGCCGGCGAAGATCAGACGTTGTTGGTCAGGAGGAATGCCCTCCTTATCC 2612113 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 |||||||| ||||||| |||| |||||||| | ||| || || | ||||| ||| Sbjct 2612112 TGAATCTTGGACTTCACGTTGTCGATGGTGTCTGAAGATTCGACCTCAAGGGTGATGGTC 2612053 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || ||||| || || ||||| ||||| Sbjct 2612052 TTGCCGGTGAGGGTCTTGACAAAGATTTG 2612024 Score = 109 bits (120), Expect = 1e-18 Identities = 155/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 |||||||||| || | |||||||| |||||||||| ||||||||||| || || Sbjct 2612697 CGAAGTCTCAACACCAAATGGAGAGTGCTTTCCTTTTGGATGTTGTAGTCAGACAGGGTA 2612638 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||||| |||| |||||| || || ||||| | ||||| || ||||| || || Sbjct 2612637 CGGCCATCCTCCAACTGCTTGCCTGCAAAGATCAATCGCTGTTGATCCGGGGGGATACCC 2612578 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || || || ||||| || ||| || | ||| || | || || || ||||| Sbjct 2612577 TCCTTGTCTTGGATCTTCGATTTGACGTTGTCAATGGTATCAGATGACTCGACTTCCAAA 2612518 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || |||||||| ||||| ||||| || ||||| || || Sbjct 2612517 GTAATCGTCTTGCCCGTCAGAGTCTTGACAAAGATCTG 2612480 Score = 107 bits (118), Expect = 5e-18 Identities = 143/199 (72%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || || | ||| | ||||||||||| || | ||||||||| || ||| Sbjct 2612013 CGAAGACGAAGAACCAAGTGCAAGGTCGACTCCTTCTGAATGTTGTAGTCGCTCAGAGTG 2611954 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | |||||||| |||||||| || ||||||||||| ||||| || || || ||| ||| Sbjct 2611953 CGGCCATCTTCAAGCTGCTTACCAGCGAAGATGAGGCGCTGTTGATCGGGGGGAATGCCT 2611894 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||| ||||| ||| ||| |||| ||| || | | ||| || || | Sbjct 2611893 TCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTATCGCTGGATTCGACCTCAAGG 2611834 Query 199589 GTGATCGTCTTACCCGTGA 199607 ||||| ||||| || |||| Sbjct 2611833 GTGATGGTCTTGCCGGTGA 2611815 >seq2 Length=4816724 Score = 113 bits (124), Expect = 1e-19 Identities = 98/122 (80%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 || |||| ||||| |||||||| ||||||||||| || | ||||||||| | | ||| Sbjct 234640 CGGAGTCGGAGGACGAGGTGGAGGGTCGACTCCTTCTGAATGTTGTAGTCGGAAAGAGTG 234581 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | |||||||| || ||||| ||||||||||| ||||| || ||||| ||| ||||||| Sbjct 234580 CGGCCATCTTCGAGTTGCTTGCCGGCGAAGATCAGACGTTGTTGGTCAGGAGGAATTCCT 234521 Query 199529 TC 199530 || Sbjct 234520 TC 234519 >seq3 Length=3603273 Score = 96.9 bits (106), Expect = 8e-15 Identities = 130/181 (72%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 199440 CCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAGA 199499 ||||||||| ||||||||| || || | ||||| || || |||||||||||||| | Sbjct 2486606 CCTTTTGGATGTTGTAGTCGCTCAGGGTTCGGCCATCCTCGAGTTGCTTTCCGGCGAAAA 2486665 Query 199500 TGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTCACGGATT 199559 | | ||||| || || ||| |||||||| || || ||||| ||| ||| | Sbjct 2486666 TCAATCGCTGTTGATCGGGAGGGATTCCTTCCTTGTCTTGGATCTTGGACTTGACGTTGT 2486725 Query 199560 CGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTCACAA 199619 ||| |||||| | || || || || | ||||| ||||| |||||||| || || || | Sbjct 2486726 CGATGGTGTCGGATGACTCCACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGA 2486785 Query 199620 A 199620 | Sbjct 2486786 A 2486786 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178921026012546