Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20spinifera_20[genbank_20GCA_5F001599535.1_202016-03-01] 38 sequences; 32,702,796 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq1 116 4e-21 seq3 109 5e-19 >seq1 Length=5022262 Score = 116 bits (128), Expect = 4e-21 Identities = 151/206 (73%), Gaps = 2/206 (1%) Strand=Plus/Plus Query 38266 TCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCA-AACGCTTAAA 38324 |||| ||||| ||||||||| | || ||||| ||| ||| | | | | |||| | || Sbjct 2611815 TCACCGGCAAGACCATCACCCTTGAGGTCGAATCCAGCGATACCATCGACAACG-TCAAG 2611873 Query 38325 GAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGC 38384 || |||| ||||| || || |||||| |||| |||||||| ||||| | ||| || Sbjct 2611874 TCCAAGATCCAGGACAAGGAAGGCATTCCCCCCGATCAACAGCGCCTCATCTTCGCTGGT 2611933 Query 38385 AAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTG 38444 || ||||| || || | ||||| || | |||||||||||| || ||||| |||| || Sbjct 2611934 AAGCAGCTTGAAGATGGCCGCACTCTGAGCGACTACAACATTCAGAAGGAGTCGACCTTG 2611993 Query 38445 CATTTGGTGCTGCGTTTGAGAGGCGG 38470 || ||||| || ||| | | ||||| Sbjct 2611994 CACTTGGTTCTTCGTCTTCGTGGCGG 2612019 Score = 109 bits (120), Expect = 5e-19 Identities = 148/204 (73%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| || || || || ||||| ||||| ||||||||| | || ||||| | | Sbjct 2612021 ATGCAAATCTTTGTCAAGACCCTCACCGGCAAGACCATCACCCTTGAGGTCGAATCTTCA 2612080 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| | || || || | || || ||||| ||||| | ||||| Sbjct 2612081 GACACCATCGACAACG-TGAAGTCCAAGATTCAGGATAAGGAGGGCATTCCTCCTGACCA 2612139 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||| || || || | ||| ||||| || || || |||| ||||||||| ||||||||| Sbjct 2612140 ACAACGTCTGATCTTCGCCGGCAAGCAACTCGAAGACGGCCGCACCCTCTCCGACTACAA 2612199 Query 38423 CATCCAAAAGGAAGCGACGCTGCA 38446 |||||| || ||| | || || || Sbjct 2612200 CATCCAGAAAGAATCCACTCTCCA 2612223 Score = 102 bits (112), Expect = 8e-17 Identities = 162/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || || |||||||| || || || | || |||||| | | Sbjct 2612477 ATGCAGATCTTTGTCAAGACTCTGACGGGCAAGACGATTACTTTGGAAGTCGAGTCATCT 2612536 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 || | | | | |||| | ||| || |||| ||||| ||||| || ||| | || || Sbjct 2612537 GATACCATTGACAACG-TCAAATCGAAGATCCAAGACAAGGAGGGTATCCCCCCGGATCA 2612595 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 |||||| | || | || ||||| ||| |||| || | || ||||| |||||||| Sbjct 2612596 ACAGCGATTGATCTTTGCAGGCAAGCAGTTGGAGGATGGCCGTACCCTGTCTGACTACAA 2612655 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGCC 38472 ||||||||||||| || || ||||||||| || | | | ||||||| Sbjct 2612656 CATCCAAAAGGAAAGCACTCTCCATTTGGTGTTGAGACTTCGTGGCGGCC 2612705 Score = 89.7 bits (98), Expect = 5e-13 Identities = 160/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || || ||||||||||| ||||| |||| || || || | Sbjct 2612249 ATGCAGATCTTCGTCAAGACCCTTACGGGCAAAACTATCACACTCGAAGTTGAATCCTCA 2612308 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 |||| | | |||| |||||| || || | |||||||| || || || |||||| Sbjct 2612309 GACACAATCGACAACG--TAAAGAGCAAGATTCAAGACAAAGAAGGCATCCCACCCGACC 2612366 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 |||| || | || | || || || || |||| || | | || ||| || |||| Sbjct 2612367 AACAACGATTGATCTTTGCAGGAAAGCAATTGGAAGATGGCAGAACTCTCTCAGATTACA 2612426 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 |||||||||| ||| | ||||| ||| | || || | || |||| ||| Sbjct 2612427 ACATCCAAAAAGAATCCACGCTACATCTCGTCTTGAGACTGCGAGGTGGC 2612476 >seq3 Length=3603273 Score = 109 bits (120), Expect = 5e-19 Identities = 135/182 (74%), Gaps = 2/182 (1%) Strand=Plus/Minus Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312 ||||| || || ||||||||||| ||||||||| | || || ||| | |||||| | | Sbjct 2486786 TTCGTCAAGACCCTCACGGGCAAGACCATCACCCTTGAGGTGGAGTCATCCGACACCATC 2486727 Query 38313 CA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCT 38371 | |||| | || || |||| ||||| || ||||| || |||| |||||||| | Sbjct 2486726 GACAACG-TCAAGTCCAAGATCCAAGACAAGGAAGGAATCCCTCCCGATCAACAGCGATT 2486668 Query 38372 CATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAA 38431 |||| ||| || || || || || || | || ||||| | |||||||||||||||||| Sbjct 2486667 GATTTTCGCCGGAAAGCAACTCGAGGATGGCCGAACCCTGAGCGACTACAACATCCAAAA 2486608 Query 38432 GG 38433 || Sbjct 2486607 GG 2486606 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500172562417920