Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20spinifera_20[genbank_20GCA_5F001599535.1_202016-03-01] 38 sequences; 32,702,796 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq4 140 2e-27 seq7 87.8 1e-11 >seq4 Length=3308965 Score = 140 bits (154), Expect = 2e-27 Identities = 420/640 (66%), Gaps = 10/640 (2%) Strand=Plus/Plus Query 518015 ACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACT 518074 || |||||||| || || || ||||| ||||| | ||||| || | || | | ||| Sbjct 495165 ACCAGACGATTGTCGAAGTCCTCACCACCCAAGTGAGTATCACCAGCGGTCGACTTGACT 495224 Query 518075 TGGAAAAGTCCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCA 518134 | || | || ||||| | | ||| || | ||||| ||| |||||||| | ||| Sbjct 495225 TCAAAGATACCCTCTTCGATGGTCAAGAGGGAGACATCGAAGGTACCACCACCAAGATCG 495284 Query 518135 AAAATAAGTACATTCATTTCTTTGTCT-TGGTTTT--TATCAAGACCATACGCAAAAGCA 518191 || || || ||||| || | | |||| || ||||||||||||| |||| ||| Sbjct 495285 AAGATGAGGACATTGCGCTC---GCCAGTGGTCTTCTTATCAAGACCATAGGCAATGGCA 495341 Query 518192 GCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCT 518251 || || || ||||| || || || | | || || ||||| ||||| || || ||| Sbjct 495342 GCTGCGGTGGGTTCGTTGATGATACGGAGGACGTTGAGACCGGCAATGAGGCCGGCGTCT 495401 Query 518252 TTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTT 518311 || ||||| |||||||| ||||| || || ||||| || || | ||||| | | Sbjct 495402 TTTGTGGCCTGTCTTTGACTGTCGTTGAAGTAGGCAGGGACTGTGACGACGGCGTTGTTG 495461 Query 518312 ACTTCTTTACCAATATAAGCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAA 518371 || || | ||| | || || | | |||| || | || | ||| || || Sbjct 495462 ACAGTGCCGCCGAGATATGATTCAGCGGTCTCTCTCATCTTTGTCAAGACCATCGAGGAG 495521 Query 518372 ATTTGTTCTGGGGAATATTGCTTGGATTC-ATTTTGATATGATACTTCAAAATATGGTTT 518430 || | |||||| | |||| || | ||| |||| || ||||||| |||||| Sbjct 495522 ATCTCTTCTGGTGTGAATTGTTTTGTTTCGCCCTTGA-ATTCGACTTCAATGACTGGTTT 495580 Query 518431 ATTACCAACATTAATAACTTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTG-GT 518489 || | || || || || || | | ||||| || | ||||| || | | Sbjct 495581 GCCGCCCTTGTCGATGACCTTGAAGGGGAAATGCTTCATGTCAGCCTGAAC-CTCAGCAT 495639 Query 518490 CATTAAAATCTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTG 518549 || | || | | ||||| ||||| || || || |||| ||| |||| || || || | Sbjct 495640 CACTGAATTTCCGGCCAATCAATCGCTTGGCGTCGAAAACAGTGTTGGCAGGGTTCATAG 495699 Query 518550 CAGCTTGATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATG 518609 | |||| | || || ||||| ||||| ||| | || || ||||| || | || | | Sbjct 495700 CGACTTGGTTCTTTGCAGCATCACCAATGAGACGCTCGGTGTCTGTGAAGGCCACGAAGG 495759 Query 518610 ATGGAGTTGTGCGATTACCTTGATCATTCGCAATAATTTC 518649 | |||||||| || || ||||| ||||| ||||| ||||| Sbjct 495760 AGGGAGTTGTTCGGTTGCCTTGGTCATTGGCAATGATTTC 495799 >seq7 Length=2248210 Score = 87.8 bits (96), Expect = 1e-11 Identities = 234/357 (66%), Gaps = 3/357 (1%) Strand=Plus/Minus Query 518026 ATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCC 518085 ||| ||||||||||| || | | ||||| || | || || || | ||||| || Sbjct 911609 ATCGAAATCTTCACCACCGAGATGAGTATCACCGGCAGTGGCCAAGACCTCGAAAACGCC 911550 Query 518086 ATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTAC 518145 |||||||| || | || | ||||| || || ||||| | ||| | | | | Sbjct 911549 ATCTTCAATTGAAAGGAGGGAGACATCGAAAGTACCGCCACCAAGATCGTAGACGATGAT 911490 Query 518146 ATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTC 518205 | | |||||| | | | || || || || || || | |||||||| |||||||| Sbjct 911489 TTGGCTCTCTTTGCCCT---TCTTGTCGAGTCCGTAGGCGATGGCAGCAGCCGTTGGTTC 911433 Query 518206 ATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCT 518265 ||| | | | | ||| | |||||||| || | || || ||||| || |||||||| Sbjct 911432 ATTGACCACACGGAGAACCGTCAGACCAGCGATCGTCCCAGCGTCTTTTGTTGCTTGTCT 911373 Query 518266 TTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAAT 518325 || | |||||| || || || || || || | |||||||| || |||| || || | Sbjct 911372 CTGGGCATCGTTGAAGTAGGCCGGCACCGTGACAACGGCATGGGTAACTTTCTTGCCCAA 911313 Query 518326 ATAAGCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGG 518382 || || ||| || ||||| || | || | ||| | ||||||| ||| || Sbjct 911312 GTATGCTTCTGCGACTTCCTTCATCTTGCCCAATACCATGGCGGAAATTTCTTCGGG 911256 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780820514314828