Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20spinifera_20[genbank_20GCA_5F001599535.1_202016-03-01] 38 sequences; 32,702,796 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq5 215 6e-51 seq1 91.5 2e-13 >seq5 Length=2876130 Score = 215 bits (238), Expect = 6e-51 Identities = 907/1407 (64%), Gaps = 59/1407 (4%) Strand=Plus/Plus Query 111612 CCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTT 111671 ||||| ||||| ||||||| ||| | | || ||||| || || ||| | ||| || Sbjct 2651621 CCACAACACATGCTCATGCGTGTCTCTGTGGGCATCCACGGTGATGATGTCGATAAGGTG 2651680 Query 111672 TTGGAGACATACGACAAGATGTCCCGTGGTATG-TTCATCCACGCAACACCAACCCTCTT 111730 | ||||| ||| || ||||| | | || |||| || || | |||||| | || Sbjct 2651681 CTTGAGACGTACCACCTCATGTCTCA-GAAGTGCTTCACTCATGCCTCGCCAACCTTGTT 2651739 Query 111731 CAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGA 111790 |||||| || ||||| ||| ||| |||| || ||||| || | | ||| || Sbjct 2651740 CAACGCCGGAACACCTCAACCTCAACTGTCGTCATGCTTCCTGATCGACATGAAGTCCGA 2651799 Query 111791 TTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGG 111850 || | || || |||| || || | ||||| ||||| ||| ||||| Sbjct 2651800 CAGCATTGAGGGTATCTACGATACGCTGAAGACTTGTGCTATGATCTCCAAGACTGCTGG 2651859 Query 111851 TGGTATCGGG----ATGCACA-TCCATGATGTCAGAGCCAACAAGTCTCGTA--TTAGAG 111903 |||||||| |||| || | ||| || | |||| | | ||| || || | Sbjct 2651860 CGGTATCGGTTTGAATGCTCACTGCAT----TC-GTGCCACC--GGCTCATACATTGCCG 2651912 Query 111904 GTACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGC 111963 | || ||||| || |||| | || || |||||||| || || ||| ||| || | Sbjct 2651913 GCACTAATGGCACGTCGAATGGCCTCATCCCCATGCTTCGTGTCTTCAACAACACTGCCC 2651972 Query 111964 GCTATGTAAACCAAGCTGG------GCGTCGCAAGGGATCTATCGCAGTCTATCTTGAGC 112017 ||||||| |||| | ||| ||| | | || || | || |||| ||||||| Sbjct 2651973 GCTATGTTGACCAGGGTGGCAACAAGCGCCCC---GGTGCTTTTGCCATCTACCTTGAGC 2652029 Query 112018 CATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGG 112077 | |||||||| ||| | | || ||| | | || | || || || | || || | Sbjct 2652030 CCTGGCACGCTGATGTTTTTGACTTCTTGAACCTGAGAAAGAATCACGGCAAAGAAGAAG 2652089 Query 112078 CGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTG 112137 || ||| ||||| |||| |||||||||| ||| || || ||||||| | || | Sbjct 2652090 TCCGTGCCCGTGATCTGTTCTATGCTCTCTGGACTCCTGACCTGTTCATGAGCCGCGTCG 2652149 Query 112138 AGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCG 112197 || ||| | ||| | ||||| || || | ||||||| ||||| | |||| | Sbjct 2652150 AGAAGAACCAAGACTGGACCCTCTTCTGCCCTCATGAGGCACCGGGTCTTGCTGATGTCT 2652209 Query 112198 TGGGTGAGGAGTTTGAAGCCCTCTAC---ACAAAGTACGAGGAAGAAAGTCGGGCGACTG 112254 || ||||||||||| || |||||| | | | |||| | | || || || | Sbjct 2652210 ATGGCGAGGAGTTTGAGGCTCTCTACGAGCGATATGAAAAGGAGGGACGT-GGTCGCC-- 2652266 Query 112255 CGACGGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTA 112314 ||| | ||| | ||||| | |||||||| | | ||||||||||| |||| Sbjct 2652267 AGACCATCAAGGCTCAGAAATTGTGGTATGCTATTCTTGAAGCACAAACCGAGACCGGTA 2652326 Query 112315 CACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTG 112374 | || |||||||||||||| || || || ||| | ||||| || || ||||| |||| Sbjct 2652327 CTCCGTATATGCTTTACAAGGATGCATGCAACAAGAAGAGCAACCAGAAGAACCTGGGGA 2652386 Query 112375 TGATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGG 112434 || ||| || || || || || |||||| | || | || | ||| ||| | Sbjct 2652387 CAATTCGGAGCTCAAATCTTTGCACCGAAATCGTCGAGTACACTGCGCCAGACGAGGTTG 2652446 Query 112435 CTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAG-AGACAAAGACA 112493 |||| || || || || || | || || || | | ||| || | || | || | Sbjct 2652447 CTGTCTGCAATCTTGCTTCGCTGGCCCTGCCGACCTTTGTCGACCAAGCCCGCGGTGA-A 2652505 Query 112494 TTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTT 112553 | ||| | | |||||||| ||||| || ||||| ||| | |||| | || Sbjct 2652506 TATGACTTCGGTCGTCTCCACGAGGTTACTCAAGTCGTCACCCGCAACTTGAACAAAATT 2652565 Query 112554 ATTGATAGAAATTTTTACCCCGTT---GAGACTGCTCGTAAATCTAATATGAGACACCGT 112610 || || | || | || || ||| ||| | | | | | | || ||| ||||||| Sbjct 2652566 ATCGACATCAACTACTATCCTGTTCCCGAGGC--CAAGAACAGC-AACATGCGACACCGA 2652622 Query 112611 CCAATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCATT---CTTTGTCGCCACGCA 112667 ||||||||||||||||| |||||||| || |||| ||| || ||| ||| | | Sbjct 2652623 CCAATTGGTCTCGGTGTACAAGGTCTGGCAGATGCTTTCCTTGCCCTTCGTCTGC---CT 2652679 Query 112668 TTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCC 112727 ||||| || ||||| | |||| | || || ||||| || ||||||||| Sbjct 2652680 TTTGACTCGCCGGAAGCCCGACAGCTCAACATCCAGATCTTCGAGACCATCTATCACGCC 2652739 Query 112728 GCTCTTGA-GGCGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGG 112786 || ||||| || | ||| | || ||| | || || ||| | || | |||||| Sbjct 2652740 GC-CTTGACAGCCTCATGCGAGCTCGCCAAGGAGCAAGGCCCTTATCAGACATATGAGGG 2652798 Query 112787 TTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGA----GACCAAGC 112842 ||||| || ||||| || ||||||| |||||||| |||| || | ||| | | Sbjct 2652799 CAGTCCAGTCTCCCAAGGCGTCCTTCAATATGATATGT-GGAATGTTACTCCGACAGACC 2652857 Query 112843 TTCACTACGACTGGGACGCTCTCAAGGAACGCAT--CAAGGAGAAGGGTCTTCGTAACAG 112900 | | ||||||||| || |||| || ||| || | ||| | || ||| Sbjct 2652858 T---GTGGGACTGGGACAGCCTGAAGGCTGAAATTGCAA--AGCATGGTGTCCGCAACTC 2652912 Query 112901 TCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATG 112960 |||| | | || || ||||| || || ||||| | || ||||||||||| || ||||| Sbjct 2652913 TCTTCTTGTTGCTCCCATGCCCACTGCATCCACATCTCAGATCTTGGGTAACAACGAATG 2652972 Query 112961 CTTTGAACCCTACACGACGAACATCTA 112987 ||| || || |||||| | |||||||| Sbjct 2652973 CTTCGAGCCATACACGTCAAACATCTA 2652999 >seq1 Length=5022262 Score = 91.5 bits (100), Expect = 2e-13 Identities = 162/234 (69%), Gaps = 2/234 (1%) Strand=Plus/Minus Query 16056 TTTCCCACGGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGACT 16115 || || | ||| || || ||||| ||||||| ||| || ||| ||||| | || Sbjct 991623 TTGCCGATGGCGTCGATTTCATCGATGAAGATGATACAGGGTGCATTTTTTCTCGCATTC 991564 Query 16116 TCAAAGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCG 16175 |||| ||||||||||| | | | || ||||| |||||||| ||||| || | | | Sbjct 991563 GCAAACAGATCCCGTACTCTCGACGGACCAACACCGACAAACATTTCCACGAATTCAGAG 991504 Query 16176 GCGGAACATTG-GATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGT 16234 ||| ||| | | ||| |||||| ||| || || || | || ||| ||||| || Sbjct 991503 CCGG-ACACCGAGTAGAAAGGGACACCAGACTCGCCAGCTGTTGCCTTGGCCAGAAGTGT 991445 Query 16235 CTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCC 16288 ||||| |||||||| ||| | | || || ||||| ||||| |||||||| Sbjct 991444 TTTACCAGTACCTGGAGGACCAGACAAGATTGCGCCTCGAGGAATTTTGGCGCC 991391 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620742105147360