Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20spinifera_20[genbank_20GCA_5F001599535.1_202016-03-01] 38 sequences; 32,702,796 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq5 118 1e-21 >seq5 Length=2876130 Score = 118 bits (130), Expect = 1e-21 Identities = 357/544 (66%), Gaps = 8/544 (1%) Strand=Plus/Minus Query 48263 TTCTTCATTGCCACTATTCCTTTTAAG-TTCAAGAAAGTCCATTATATCAGCATGCCATG 48321 |||||| ||||| |||| || | || |||||||| ||| | | |||||| ||||| | Sbjct 2652088 TTCTTCTTTGCCGTGATTCTTTCTCAGGTTCAAGAA-GTCAAAAACATCAGCGTGCCAGG 2652030 Query 48322 GTTCTAAATATATTGCCATTACACCTGGTCGTTTATTACCTCCTTGATCTATATATCTGG 48381 | || | || || || | |||| || || || || || || || || | ||| | || Sbjct 2652029 GCTCAAGGTAGATGGCAAAAGCACCGGGGCGCTTGTTGCCACCCTGGTCAACATAGCGGG 2651970 Query 48382 CAGTATTGTTATAAACTCTTAACATTGGGACAATACCATTTGATATACCATTGGTTCCCG 48441 |||| ||||| | || | | ||| |||| | ||||| || | ||||| || || | Sbjct 2651969 CAGTGTTGTTGAAGACACGAAGCATGGGGATGAGGCCATTCGACGTGCCATTAGTGCCGG 2651910 Query 48442 AAATATAACTTCCACTAGCTCTTAT--ATTACTAATTGAAATACCTATACCACCTGCCAT 48499 ||| || || | || | || | | ||| ||| || ||||| || || | Sbjct 2651909 CAATGTATGAGCCGGTGGCACGAATGCAGTGAGCATTCAAA--CCGATACCGCCAGCAGT 2651852 Query 48500 TTTAGATATTAGAGCACACCGTTTAAGGGTATCATAAATTCCTTCTATACTATCATCTAT 48559 || || || | |||||| || || ||||| || || || || || || || | Sbjct 2651851 CTTGGAGATCATAGCACAAGTCTTCAGCGTATCGTAGATACCCTCAATGCTGTCGGACTT 2651792 Query 48560 CATATTTAATAGAAAACAACTAGACATTTGCGGATGACAAGTTCCTGAATTAAATAATGT 48619 ||| | | || || || |||| ||| || ||| ||||| | || || || || Sbjct 2651791 CATGTCGATCAGGAAGCATGACGACAGTTGAGGTTGAGGTGTTCCGGCGTTGAACAAGGT 2651732 Query 48620 TGGAGATGCATGAATAAACCATTTCTCTGATAACAATTTATATGTTTCAATAACAGAATC 48679 ||| || |||||| | || || |||| || | | | || || |||| || ||| Sbjct 2651731 TGGCGAGGCATGAGTGAAGCACTTCTGAGACATGAGGTGGTACGTCTCAAGCACCTTATC 2651672 Query 48680 TATATCC-CATTGATGTATACCTATAGATACACGCATTAACATATATTGAGGTCTTTCAA 48738 | ||| || | || || || | ||| |||||||| | ||| | ||| |||| ||| Sbjct 2651671 GACATCATCACCG-TGGATGCCCACAGAGACACGCATGAGCATGTGTTGTGGTCGCTCAG 2651613 Query 48739 CAATTTTGTTATTTATTTTCAAAAGATATGATTTTTCCAATGTTTTAAAACCAAAATAGT 48798 ||| || || || |||| ||||||||| ||||||| || || || |||||||||| Sbjct 2651612 CAACTTGCTTGCCAATCTTCAGCAGATATGATCTTTCCAACGTCTTGAAGCCAAAATAGT 2651553 Query 48799 TGTA 48802 |||| Sbjct 2651552 TGTA 2651549 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562108532998320