Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20spinifera_20[genbank_20GCA_5F001599535.1_202016-03-01] 38 sequences; 32,702,796 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq1 167 2e-36 seq3 89.7 4e-13 >seq1 Length=5022262 Score = 167 bits (184), Expect = 2e-36 Identities = 164/212 (77%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 101258 AAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCG 101317 || || | ||| || || ||||||||||| || |||||||| | || ||||||| |||| Sbjct 2612460 AAGACGAGATGTAGCGTGGATTCTTTTTGGATGTTGTAATCTGAGAGAGTTCTGCCATCT 2612401 Query 101318 TCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCT 101377 ||||||||||| |||||||| ||||| || ||||| ||||| || ||||||||||| ||| Sbjct 2612400 TCCAATTGCTTTCCTGCAAAGATCAATCGTTGTTGGTCGGGTGGGATGCCTTCTTTGTCT 2612341 Query 101378 TGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTT 101437 ||||| || ||||| | || | ||||| || | ||| ||||| || |||| ||| Sbjct 2612340 TGAATCTTGCTCTTTACGTTGTCGATTGTGTCTGAGGATTCAACTTCGAGTGTGATAGTT 2612281 Query 101438 TTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 ||||| || | || || || || |||||||| Sbjct 2612280 TTGCCCGTAAGGGTCTTGACGAAGATCTGCAT 2612249 Score = 118 bits (130), Expect = 8e-22 Identities = 154/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 101258 AAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCG 101317 || || ||||| || || ||| ||||| || ||||| || | | || | | |||| Sbjct 2612688 AACACCAAATGGAGAGTGCTTTCCTTTTGGATGTTGTAGTCAGACAGGGTACGGCCATCC 2612629 Query 101318 TCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCT 101377 ||||| ||||| |||||||| ||||| ||||||||||| || || || || || || ||| Sbjct 2612628 TCCAACTGCTTGCCTGCAAAGATCAATCGCTGTTGATCCGGGGGGATACCCTCCTTGTCT 2612569 Query 101378 TGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTT 101437 || || || ||| || | || | || ||||| | || ||||| | ||| | ||| Sbjct 2612568 TGGATCTTCGATTTGACGTTGTCAATGGTATCAGATGACTCGACTTCCAAAGTAATCGTC 2612509 Query 101438 TTGCCGGTTAAAGTTTTTACAAATATCTGCATG 101470 ||||| || | ||| || ||||| ||||||||| Sbjct 2612508 TTGCCCGTCAGAGTCTTGACAAAGATCTGCATG 2612476 >seq3 Length=3603273 Score = 89.7 bits (98), Expect = 4e-13 Identities = 118/164 (72%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 101282 TTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATC 101341 ||||| || ||||| ||| | |||| | |||| || | |||||| || || || ||| Sbjct 2486608 TTTTGGATGTTGTAGTCGCTCAGGGTTCGGCCATCCTCGAGTTGCTTTCCGGCGAAAATC 2486667 Query 101342 AAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCT 101401 || |||||||||||||| || || ||||| || ||||| || || || || | || Sbjct 2486668 AATCGCTGTTGATCGGGAGGGATTCCTTCCTTGTCTTGGATCTTGGACTTGACGTTGTCG 2486727 Query 101402 ACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGT 101445 | ||||| || | ||||| ||||| |||| || ||||| || Sbjct 2486728 ATGGTGTCGGATGACTCCACCTCAAGGGTGATGGTCTTGCCCGT 2486771 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396278216473566