Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20spinifera_20[genbank_20GCA_5F001599535.1_202016-03-01] 38 sequences; 32,702,796 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq4 104 7e-17 seq5 96.9 1e-14 seq1 91.5 4e-13 >seq4 Length=3308965 Score = 104 bits (114), Expect = 7e-17 Identities = 126/169 (75%), Gaps = 2/169 (1%) Strand=Plus/Minus Query 251407 ATAAGACCACACTTATTACACACATGGACGCTGTAAGCATCAGATGCGTCATATAGCCGA 251466 || || || || ||| || ||||| || ||| | | ||| || |||| | || || Sbjct 3048446 ATCAGCCCGCAGATATCGCAGACATGCACTCTGAACGGATCCGAGACGTCGAACAGGCGC 3048387 Query 251467 CCCTTGGTGAAGCGAGATG-CACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAA 251525 |||| ||| |||| || | ||||| | |||||||| || ||||||||||| ||||| Sbjct 3048386 TCCTTCAAGAA-CGAGCTGGCGCCGTGGGCGATCATACAGTCGCGCTCCATTTCTCCGAA 3048328 Query 251526 ACGAAGACCACCATCGCGAGCCCTACCCTCGGCAGGCTGACGAGTGAGA 251574 ||| |||||||| |||||||| | ||| ||| | ||||| ||||||||| Sbjct 3048327 ACGCAGACCACCGTCGCGAGCACGACCTTCGACGGGCTGGCGAGTGAGA 3048279 >seq5 Length=2876130 Score = 96.9 bits (106), Expect = 1e-14 Identities = 328/508 (65%), Gaps = 5/508 (1%) Strand=Plus/Minus Query 155936 CCAAATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCT-CATCGCCGTGATTCTTCCGTA 155994 ||| | ||||||||| || || | || |||| || | | |||||||||||| | | Sbjct 2652121 CCAGAGAGCATAGAACAGATCACGGGCACG-GACTTCTTCTTTGCCGTGATTCTTTCTCA 2652063 Query 155995 GCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAAACTACCAT 156054 | | ||||| || || ||||| || ||||| || || || |||||| ||| Sbjct 2652062 GGTTCAAGAAGTCAAAAACATCAGCGTGCCAGGGCTCAAGGTAGATGGCAAAAGCACCGG 2652003 Query 156055 TCCTCTTG---CCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAG 156111 | |||| |||||||| || ||||| || ||||| || |||||||||| ||||| | Sbjct 2652002 GGCGCTTGTTGCCACCCTGGTCAACATAGCGGGCAGTGTTGTTGAAGACACGAAGCATGG 2651943 Query 156112 GAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGCGAACAT 156171 | || | ||||| || |||||||| || ||| ||| | || || | | |||| Sbjct 2651942 GGATGAGGCCATTCGACGTGCCATTAGTGCCGGCAATGTATGAGCCGGTGGCACGAATGC 2651883 Query 156172 TATGAATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTTACAG 156231 ||| || | || ||||| || | || || || ||| || ||| | | Sbjct 2651882 AGTGAGCATTCAAACCGATACCGCCAGCAGTCTTGGAGATCATAGCACAAGTCTTCAGCG 2651823 Query 156232 TATTGAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAACTTAATT 156291 ||| | | ||||| ||||| || | ||| | || |||| || | || Sbjct 2651822 TATCGTAGATACCCTCAATGCTGTCGGACTTCATGTCGATCAGGAAGCATGACGACAGTT 2651763 Query 156292 GAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATACTTATTAG 156351 ||||| | |||||||| |||||||| | || || | |||||| | || |||| | || Sbjct 2651762 GAGGTTGAGGTGTTCCGGCGTTGAACAAGGTTGGCGAGGCATGAGTGAAGCACTTCTGAG 2651703 Query 156352 ACATATAATCGTATGTCTCCTTAATCTTCTCAAGATTAGACCCGTGAATACAGATAGAGA 156411 |||| | ||| ||||| | ||| || | || | ||||| || | | ||||| Sbjct 2651702 ACATGAGGTGGTACGTCTCAAGCACCTTATCGACATCATCACCGTGGATGCCCACAGAGA 2651643 Query 156412 CCCTCATCCACATATGCTGAGGACGCTC 156439 | | ||| ||| || || || ||||| Sbjct 2651642 CACGCATGAGCATGTGTTGTGGTCGCTC 2651615 >seq1 Length=5022262 Score = 91.5 bits (100), Expect = 4e-13 Identities = 137/192 (71%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 289036 GCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAATTGCAAATAAT 289095 || || ||||| || ||||| || | ||| || | ||||| ||||||| | ||||| | Sbjct 991614 GCGTCGATTTCATCGATGAAGATGATACAGGGTGCATTTTTTCTCGCATTCGCAAACAGA 991555 Query 289096 TCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAAGCGGATACT 289155 || | ||| | || | |||| ||| ||| ||||||| || |||||||| |||| || Sbjct 991554 TCCCGTACTCTCGACGGACCAACACCGACAAACATTTCCACGAATTCAGAGCCGGACACC 991495 Query 289156 TGAAT-GAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCTTACCTGT 289214 || | ||| | ||| | ||||| ||| |||| | ||||||||||| ||||| || Sbjct 991494 -GAGTAGAAAGGGACACCAGACTCGCCAGCTGTTGCCTTGGCCAGAAGTGTTTTACCAGT 991436 Query 289215 TCCAGGTGGTCC 289226 || || || || Sbjct 991435 ACCTGGAGGACC 991424 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471816883408806