Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20spinifera_20[genbank_20GCA_5F001599535.1_202016-03-01] 38 sequences; 32,702,796 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq5 152 6e-31 seq6 131 2e-24 >seq5 Length=2876130 Score = 152 bits (168), Expect = 6e-31 Identities = 219/309 (71%), Gaps = 0/309 (0%) Strand=Plus/Minus Query 1630065 CTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGA 1630124 |||||| || ||||| || |||| ||| ||||| || |||||||| | |||||| || || Sbjct 2651986 CTGGTCAACATAGCGGGCAGTGTTGTTGAAGACACGAAGCATGGGGATGAGGCCATTCGA 2651927 Query 1630125 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCC 1630184 | ||| || ||||| || | ||| | ||||| ||| || | ||| || || || Sbjct 2651926 CGTGCCATTAGTGCCGGCAATGTATGAGCCGGTGGCACGAATGCAGTGAGCATTCAAACC 2651867 Query 1630185 GATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTC 1630244 ||| ||||| || | ||||||||| | || || || ||||| |||||||| ||||| Sbjct 2651866 GATACCGCCAGCAGTCTTGGAGATCATAGCACAAGTCTTCAGCGTATCGTAGATACCCTC 2651807 Query 1630245 GATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCC 1630304 || ||||| ||||||||| | || ||||| ||||| ||| || || | || || Sbjct 2651806 AATGCTGTCGGACTTCATGTCGATCAGGAAGCATGACGACAGTTGAGGTTGAGGTGTTCC 2651747 Query 1630305 GGCGTTGAAGAGCGTGGGCGTCGCCGCGGTGAACAACTGCCGCGACATGGCGTCGTAGGT 1630364 ||||||||| | || |||| || ||||| ||| | | |||||| || ||| || Sbjct 2651746 GGCGTTGAACAAGGTTGGCGAGGCATGAGTGAAGCACTTCTGAGACATGAGGTGGTACGT 2651687 Query 1630365 GGCGAGCAC 1630373 | ||||| Sbjct 2651686 CTCAAGCAC 2651678 Score = 95.1 bits (104), Expect = 1e-13 Identities = 116/155 (75%), Gaps = 4/155 (3%) Strand=Plus/Plus Query 19047 GACAGCATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCA--GGCCTCGGCG 19104 ||||| || || || || ||||| |||||| ||| || |||| || || ||||| | Sbjct 2645623 GACAGTATTGGAGGGACAGTGACATGCGTGATTCGAAAT-TGCCC-CATTGGACTCGGGG 2645680 Query 19105 AGCCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCA 19164 | ||||| || |||||| |||| |||| |||||||| ||||||||| || || || | Sbjct 2645681 AACCGTGTTTCGACAAGCTCGAAGCCGAACTCGCCCATGCCATGCTGAGTATACCAGCTA 2645740 Query 19165 CCAAGGGATTCGAGATTGGCAGCGGGTTTGCGGGT 19199 |||| || ||||||||||| ||| || | |||| Sbjct 2645741 CCAAAGGCTTCGAGATTGGTTCCGGATTCGGGGGT 2645775 >seq6 Length=2383321 Score = 131 bits (144), Expect = 2e-24 Identities = 98/115 (85%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245 |||||||| ||||| || |||||| | |||| ||| | || |||||| |||| || ||| Sbjct 1813013 GCCGCCAATTACCTTGATATCAAGGCATTGCTTGATGTCGGATGCAAGACTGTCGCAAAC 1813072 Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAGTACG 1592300 ||||||||||||||||| ||||||||||||||||||||||| |||||| || ||| Sbjct 1813073 ATGATCAAGGGCAAGTCTCCCGAGGAGATCCGCAAGACCTTCAACATCCAGAACG 1813127 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107136081542046