Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20spinifera_20[genbank_20GCA_5F001599535.1_202016-03-01]
38 sequences; 32,702,796 total letters
Query= NC_023442.1
Length=120420
Score E
Sequences producing significant alignments: (Bits) Value
seq1 111 1e-19
>seq1
Length=5022262
Score = 111 bits (122), Expect = 1e-19
Identities = 149/205 (73%), Gaps = 2/205 (1%)
Strand=Plus/Minus
Query 29583 ATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTG 29642
||| ||||||||||||||||| ||||| ||||| | | || | ||| || | |||
Sbjct 2612452 ATGTAGCGTGGATTCTTTTTGGATGTTGTAATCTGAGAGAGTTCTGCCATCTTCCAATTG 2612393
Query 29643 TTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTT 29702
|| || ||| | ||||||| ||| || || || || || || ||||||||||| ||| |
Sbjct 2612392 CTTTCCTGCAAAGATCAATCGTTGTTGGTCGGGTGGGATGCCTTCTTTGTCTTG-AATCT 2612334
Query 29703 TTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAG 29761
| | || || | || | ||||| || ||| ||||| || || ||||||||||| |
Sbjct 2612333 TGCTCTTTACGTTGTCGATTGTGTCTGAGGATTCAACTTCGAGTGTGATAGTTTTGCCCG 2612274
Query 29762 TTAAGGTTTTAACAAATATCTGCAT 29786
| | ||| || || || ||||||||
Sbjct 2612273 TAAGGGTCTTGACGAAGATCTGCAT 2612249
Score = 95.1 bits (104), Expect = 9e-15
Identities = 145/204 (71%), Gaps = 2/204 (1%)
Strand=Plus/Minus
Query 29584 TGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGT 29643
|| || ||||||||||| || ||||| || || | | |||||| || ||||||||
Sbjct 2612223 TGGAGAGTGGATTCTTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCTTCGAGTTGC 2612164
Query 29644 TTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTT 29703
||||| || | |||| | ||| || || || ||||| ||||| || || || ||| ||
Sbjct 2612163 TTGCCGGCGAAGATCAGACGTTGTTGGTCAGGAGGAATGCCCTCCTTATCCTG-AATCTT 2612105
Query 29704 TG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGT 29762
| || || | || | ||||| ||| ||| || ||||| || || || ||||| ||
Sbjct 2612104 GGACTTCACGTTGTCGATGGTGTCTGAAGATTCGACCTCAAGGGTGATGGTCTTGCCGGT 2612045
Query 29763 TAAGGTTTTAACAAATATCTGCAT 29786
| ||| || ||||| || |||||
Sbjct 2612044 GAGGGTCTTGACAAAGATTTGCAT 2612021
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 385219021595358
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |