Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20spinifera_20[genbank_20GCA_5F001599535.1_202016-03-01] 38 sequences; 32,702,796 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq4 143 2e-28 seq7 91.5 1e-12 >seq4 Length=3308965 Score = 143 bits (158), Expect = 2e-28 Identities = 423/641 (66%), Gaps = 12/641 (2%) Strand=Plus/Plus Query 282182 ACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACT 282241 || |||||||| || || || ||||| ||||| | ||||| || | || | | ||| Sbjct 495165 ACCAGACGATTGTCGAAGTCCTCACCACCCAAGTGAGTATCACCAGCGGTCGACTTGACT 495224 Query 282242 TGGAAAAGTCCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCA 282301 | || | || ||||| | | ||| || | ||||| ||| |||||||| | ||| Sbjct 495225 TCAAAGATACCCTCTTCGATGGTCAAGAGGGAGACATCGAAGGTACCACCACCAAGATCG 495284 Query 282302 AAAATAAGTACATTCATTTCTTTGTCT-TGGTTTT--TATCAAGACCATACGCAAAAGCA 282358 || || || ||||| || | | |||| || ||||||||||||| |||| ||| Sbjct 495285 AAGATGAGGACATTGCGCTC---GCCAGTGGTCTTCTTATCAAGACCATAGGCAATGGCA 495341 Query 282359 GCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCT 282418 || || || ||||| || || || | | || || ||||| ||||| || || ||| Sbjct 495342 GCTGCGGTGGGTTCGTTGATGATACGGAGGACGTTGAGACCGGCAATGAGGCCGGCGTCT 495401 Query 282419 TTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTT 282478 || ||||| |||||||| ||||| || || ||||| || || | ||||| | |||| Sbjct 495402 TTTGTGGCCTGTCTTTGACTGTCGTTGAAGTAGGCAGGGACTGTGACGACGGCGT-TGTT 495460 Query 282479 -ACTTCTTTTCCAATATAAGCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGA 282537 || || | ||| | || || | | |||| || | || | ||| || || Sbjct 495461 GACAGTGCCGCCGAGATATGATTCAGCGGTCTCTCTCATCTTTGTCAAGACCATCGAGGA 495520 Query 282538 AATTTGTTCTGGAGAATATTGCTTGGATTC-ATTTTGATATGATACTTCAAAATATGGTT 282596 || | |||||| | |||| || | ||| |||| || ||||||| ||||| Sbjct 495521 GATCTCTTCTGGTGTGAATTGTTTTGTTTCGCCCTTGA-ATTCGACTTCAATGACTGGTT 495579 Query 282597 TATTACCAACATTAATAACTTTAAATGGCCAATATTTCATATCTGATTGAACACTTTG-G 282655 | || | || || || || || ||| ||||| || | ||||| || | Sbjct 495580 TGCCGCCCTTGTCGATGACCTTGAAGGGGAAATGCTTCATGTCAGCCTGAAC-CTCAGCA 495638 Query 282656 TCATTAAAATCTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACT 282715 ||| | || | | ||||| ||||| || || || |||| ||| |||| || || | Sbjct 495639 TCACTGAATTTCCGGCCAATCAATCGCTTGGCGTCGAAAACAGTGTTGGCAGGGTTCATA 495698 Query 282716 GCAGCTTGATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATAT 282775 || |||| | || || ||||| ||||| ||| | || || ||||| || | || | Sbjct 495699 GCGACTTGGTTCTTTGCAGCATCACCAATGAGACGCTCGGTGTCTGTGAAGGCCACGAAG 495758 Query 282776 GATGGAGTTGTGCGATTACCTTGATCATTCGCAATAATTTC 282816 || |||||||| || || ||||| ||||| ||||| ||||| Sbjct 495759 GAGGGAGTTGTTCGGTTGCCTTGGTCATTGGCAATGATTTC 495799 >seq7 Length=2248210 Score = 91.5 bits (100), Expect = 1e-12 Identities = 236/359 (66%), Gaps = 3/359 (1%) Strand=Plus/Minus Query 282193 ATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCC 282252 ||| ||||||||||| || | | ||||| || | || || || | ||||| || Sbjct 911609 ATCGAAATCTTCACCACCGAGATGAGTATCACCGGCAGTGGCCAAGACCTCGAAAACGCC 911550 Query 282253 ATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTAC 282312 |||||||| || | || | ||||| || || ||||| | ||| | | | | Sbjct 911549 ATCTTCAATTGAAAGGAGGGAGACATCGAAAGTACCGCCACCAAGATCGTAGACGATGAT 911490 Query 282313 ATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTC 282372 | | |||||| | | | || || || || || || | |||||||| |||||||| Sbjct 911489 TTGGCTCTCTTTGCCCT---TCTTGTCGAGTCCGTAGGCGATGGCAGCAGCCGTTGGTTC 911433 Query 282373 ATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCT 282432 ||| | | | | ||| | |||||||| || | || || ||||| || |||||||| Sbjct 911432 ATTGACCACACGGAGAACCGTCAGACCAGCGATCGTCCCAGCGTCTTTTGTTGCTTGTCT 911373 Query 282433 TTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAAT 282492 || | |||||| || || || || || || | |||||||| || |||| || || | Sbjct 911372 CTGGGCATCGTTGAAGTAGGCCGGCACCGTGACAACGGCATGGGTAACTTTCTTGCCCAA 911313 Query 282493 ATAAGCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGAG 282551 || || ||| || ||||| || | || | ||| | ||||||| ||| |||| Sbjct 911312 GTATGCTTCTGCGACTTCCTTCATCTTGCCCAATACCATGGCGGAAATTTCTTCGGGAG 911254 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740628534360588