Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20spinifera_20[genbank_20GCA_5F001599535.1_202016-03-01] 38 sequences; 32,702,796 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq1 131 3e-25 >seq1 Length=5022262 Score = 131 bits (144), Expect = 3e-25 Identities = 158/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655 || ||||| | ||| ||||| ||||||||||| || || || || || || | | ||| Sbjct 2612235 CGGAGAACAAGGTGGAGAGTGGATTCTTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCG 2612176 Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715 ||||| ||||| || || || ||||| || | |||||| || ||||| || || |||||| Sbjct 2612175 TCTTCGAGTTGCTTGCCGGCGAAGATCAGACGTTGTTGGTCAGGAGGAATGCCCTCCTTA 2612116 Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATC 82775 || |||||||| | || || || || || || || || ||| || || | || || Sbjct 2612115 TCCTGAATCTTGGACTTCACGTTGTCGATGGTGTCTGAAGATTCGACCTCAAGGGTGATG 2612056 Query 82776 GTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||||||| || | ||||| ||||| || ||||| Sbjct 2612055 GTCTTGCCGGTGAGGGTCTTGACAAAGATTTGCAT 2612021 Score = 131 bits (144), Expect = 3e-25 Identities = 155/205 (76%), Gaps = 4/205 (2%) Strand=Plus/Minus Query 82608 TGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGT 82667 || || || |||||||| || || || ||||| || ||| |||| || ||||| | ||| Sbjct 2612451 TGTAGCGTGGATTCTTTTTGGATGTTGTAATCTGAGAGAGTTCTGCCATCTTCCAATTGC 2612392 Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTT 82727 ||||| |||||||| | || |||||| || || || || ||||| || ||||||||| || Sbjct 2612391 TTTCCTGCAAAGATCAATCGTTGTTGGTCGGGTGGGATGCCTTCTTTGTCTTGAATC-TT 2612333 Query 82728 GCT-TTTACATTTTCAATCGTATCATTAGG-TTCTACTTCCAAAGTTATCGTCTTGCCTG 82785 ||| ||||| || || || || || | ||| ||| ||||| | || || || ||||| | Sbjct 2612332 GCTCTTTACGTTGTCGATTGTGTC-TGAGGATTCAACTTCGAGTGTGATAGTTTTGCCCG 2612274 Query 82786 TCAACGTCTTTACAAATATCTGCAT 82810 | | ||||| || || |||||||| Sbjct 2612273 TAAGGGTCTTGACGAAGATCTGCAT 2612249 Score = 129 bits (142), Expect = 1e-24 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 82602 ACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCT 82661 || || || ||||| ||| || || || || || ||||| || | | || || || Sbjct 2612685 ACCAAATGGAGAGTGCTTTCCTTTTGGATGTTGTAGTCAGACAGGGTACGGCCATCCTCC 2612626 Query 82662 AGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGA 82721 | || || || |||||||| | || |||||||| || || || || ||||| ||||| Sbjct 2612625 AACTGCTTGCCTGCAAAGATCAATCGCTGTTGATCCGGGGGGATACCCTCCTTGTCTTGG 2612566 Query 82722 ATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTG 82781 ||||| | ||| || || ||||| |||||| | || ||||||||||| ||||||||| Sbjct 2612565 ATCTTCGATTTGACGTTGTCAATGGTATCAGATGACTCGACTTCCAAAGTAATCGTCTTG 2612506 Query 82782 CCTGTCAACGTCTTTACAAATATCTGCAT 82810 || |||| ||||| ||||| |||||||| Sbjct 2612505 CCCGTCAGAGTCTTGACAAAGATCTGCAT 2612477 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981826721972882