Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20spinifera_20[genbank_20GCA_5F001599535.1_202016-03-01] 38 sequences; 32,702,796 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq3 102 8e-17 seq1 102 8e-17 >seq3 Length=3603273 Score = 102 bits (112), Expect = 8e-17 Identities = 110/146 (75%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565 |||||||| ||||| || ||| |||| | ||||| || ||||||||||| ||||||||| Sbjct 2486641 TCCTCGAGTTGCTTTCCGGCGAAAATCAATCGCTGTTGATCGGGAGGGATTCCTTCCTTG 2486700 Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625 || |||||| ||||| | || | ||||||| | |||||| || | ||||| | Sbjct 2486701 TCTTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGATGACTCCACCTCAAGGGTGATG 2486760 Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAA 133651 || ||||| || || || || ||||| Sbjct 2486761 GTCTTGCCCGTGAGGGTCTTGACGAA 2486786 >seq1 Length=5022262 Score = 102 bits (112), Expect = 8e-17 Identities = 134/183 (73%), Gaps = 2/183 (1%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 || || | ||| ||||| ||||| || ||||| |||| || ||| | | | || || || Sbjct 2611998 AAGTGCAAGGTCGACTCCTTCTGAATGTTGTAGTCGCTCAGAGTGCGGCCA-TCTTCAAG 2611940 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 |||||| || ||| | ||||| ||||| || ||||| || |||||||||||||| ||| Sbjct 2611939 CTGCTTACCAGCGAAGATGAGGCGCTGTTGATCGGGGGGAATGCCTTCCTTGTCCTGGAT 2611880 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 ||| ||||| | || | || ||| ||| || || || | ||||| ||| ||||| Sbjct 2611879 CTTGGACTTGACGTTGTCGATGGTATCGCTGGATTCGACCTCAAGGGTGATGGTCTTGCC 2611820 Query 133634 GGT 133636 ||| Sbjct 2611819 GGT 2611817 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483420570375120