Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20spinifera_20[genbank_20GCA_5F001599535.1_202016-03-01] 38 sequences; 32,702,796 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq5 183 3e-41 seq1 95.1 1e-14 >seq5 Length=2876130 Score = 183 bits (202), Expect = 3e-41 Identities = 620/953 (65%), Gaps = 17/953 (2%) Strand=Plus/Minus Query 147466 GACGCCAGATTGCAGACGGCCGTCTCTTC-GGCGTCGCTGTACTGCACGATTTCGGCGCA 147524 || || ||||||||||| || ||| || |||| | |||||| |||||||||| ||| Sbjct 2652465 GAAGCAAGATTGCAGACAGCAACCTCGTCTGGCGCAG-TGTACTCGACGATTTCGGTGCA 2652407 Query 147525 CAGGTT---GCTGCATTTTATGACTCCCAAATTTTGCTGATTGCTTTTCCGATTGCACGC 147581 || || ||| | || | |||| || | ||| ||||| ||| ||||| || Sbjct 2652406 AAGATTTGAGCTCCGAATTGTC---CCCAGGTTCTTCTGGTTGCTCTTCTTGTTGCATGC 2652350 Query 147582 GTCTTTGAAGAGCATGTACGGTCCGCCGGTCTCGACTTGCGTTTCAACGATAAACCTATG 147641 || ||| | ||||| ||||| ||||||||| ||| | ||||| ||| | || Sbjct 2652349 ATCCTTGTAAAGCATATACGGAGTACCGGTCTCGGTTTGTGCTTCAAGAATAG-CATACC 2652291 Query 147642 -CAGGTCCTGCGCTCGCACCCGCTGCCGATAGCGGCCCTCGTTTTCGTACCGCTCGTACA 147700 || | ||| || | ||| ||| || ||||| ||||| || |||||||| | Sbjct 2652290 ACAATTTCTGAGCCTTGATGGTCTGGCGACCACGTCCCTCCTTTTCATATCGCTCGTAGA 2652231 Query 147701 ACCGCTCAAACTCGTCGCCGTAGCAATCGGCAAGGCCGGGACACTGATGCGGACACATCA 147760 ||||||||| ||||| ||| ||| ||||| || || || ||| || || | | Sbjct 2652230 GAGCCTCAAACTCCTCGCCATAGACATCAGCAAGACCCGGTGCCTCATGAGGGCAGAAGA 2652171 Query 147761 GCGACCACATGTCGTCCGCGTTAACGCGTCGCATAAACAGATCCGGCACCCACAGCGCGT 147820 | | ||| | || | | ||||| | ||| ||||| || || ||| || || | Sbjct 2652170 GGGTCCAGTCTTGGTTCTTCTCGACGCGGCTCATGAACAGGTCAGGAGTCCAGAGAGCAT 2652111 Query 147821 ACATAAGATCGCGCGCTTTGCAATCCTCGGCGCCCATGTTGCGTT-TCAAATTAAGCACG 147879 | | ||||| || || | || || ||| || | | || ||| || | | | Sbjct 2652110 AGAACAGATCACGGGCACGGACTTCTTCTTTGCCG-TGATTCTTTCTCAGGTTCAAGAAG 2652052 Query 147880 CTATAGATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGCGCACCTTTACGCTTT--- 147936 | | | || ||||||||||| |||| ||||| ||| | ||||| ||||| Sbjct 2652051 TCAAAAACATCAGCGTGCCAGGGCTCAAGGTAGATGGCAAAAGCACCGGGGCGCTTGTTG 2651992 Query 147937 CCGCCCTGGTCGACATGGCGCACCATGTTGTTAAACACGCGCACCATGGGTTCCAGGCCG 147996 || |||||||| |||| ||| | ||||||| || || || | |||||| ||||| Sbjct 2651991 CCACCCTGGTCAACATAGCGGGCAGTGTTGTTGAAGACACGAAGCATGGGGATGAGGCCA 2651932 Query 147997 CTCGCAGTGCCGTTGGTGGAATTGATCTTGCTGCCGCGGGCTCGCACTTCGTGCACGTTA 148056 ||| ||||| || ||| || | |||| ||| || | ||| | || Sbjct 2651931 TTCGACGTGCCATTAGTGCCGGCAATGTATGAGCCGGTGGCACGAATGCAGTGAGCATTC 2651872 Query 148057 ACGCCAATGCCGCC-GCCGTACTTTGATATGGCAGCGCAATCGCCCAATGTCGTGTAGAT 148115 | || || ||||| || || ||| || || ||| ||| || || |||||| Sbjct 2651871 AAACCGATACCGCCAGCAGT-CTTGGAGATCATAGCACAAGTCTTCAGCGTATCGTAGAT 2651813 Query 148116 GCCGTCGATGCTGTCGTTTTTGACGCCAAGCAAAAAACACGAACACATTTGCGGAATCCG 148175 || || ||||||||| || | | | | || || || || ||| ||| || | Sbjct 2651812 ACCCTCAATGCTGTCGGACTTCATGTCGATCAGGAAGCATGACGACAGTTGAGGTTGAGG 2651753 Query 148176 CGTTCCCGCCGAGAAAAGGGTGGGACTCGCGTGCGTAAACAATTTTTGACTCATCATGCG 148235 ||||| || ||| | ||| || || || || || | || ||| ||| | | | Sbjct 2651752 TGTTCCGGCGTTGAACAAGGTTGGCGAGGCATGAGTGAAGCACTTCTGAGACATGAGGTG 2651693 Query 148236 ATACGTCTCAATAGCGTCTTCGATGTCGTCGCCGTGAATGCCCAGCGCGACGCGCATGAG 148295 |||||||||| | | |||| || || ||||| ||||||| | ||| |||||||| Sbjct 2651692 GTACGTCTCAAGCACCTTATCGACATCATCACCGTGGATGCCCACAGAGACACGCATGAG 2651633 Query 148296 CATGTGCTGTGGTCGTTCGGCAACTTGATTGTTGATCTTGAGAAGATATCCATTTTCGAG 148355 |||||| |||||||| || |||||||| ||| ||||| || |||||| |||| | Sbjct 2651632 CATGTGTTGTGGTCGCTCAGCAACTTGCTTGCCAATCTTCAGCAGATATGATCTTTCCAA 2651573 Query 148356 GGTTTTGTAACCAAAGTACTTGTAATCAAAATCTAGCTCGTAAGCGATGGCCG 148408 || ||| | ||||| || ||||| | || ||| | ||||| ||||||||| Sbjct 2651572 CGTCTTGAAGCCAAAATAGTTGTAGTTGAAGTCTCGGTCGTATACGATGGCCG 2651520 >seq1 Length=5022262 Score = 95.1 bits (104), Expect = 1e-14 Identities = 91/117 (78%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 131914 AACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTC 131973 |||||| || | | | ||||| || ||||||||||||||||||| || || |||||| Sbjct 2612002 AACCAAGTGCAAGGTCGACTCCTTCTGAATGTTGTAGTCGCTCAGAGTGCGGCCATCTTC 2611943 Query 131974 GAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATC 132030 ||||| ||||| | |||| || ||||||||||| || || |||||||| || || Sbjct 2611942 AAGCTGCTTACCAGCGAAGATGAGGCGCTGTTGATCGGGGGGAATGCCTTCCTTGTC 2611886 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476610973609680