Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20spinifera_20[genbank_20GCA_5F001599535.1_202016-03-01]
38 sequences; 32,702,796 total letters
Query= NC_025960.1
Length=148981
Score E
Sequences producing significant alignments: (Bits) Value
seq5 183 3e-41
seq1 95.1 1e-14
>seq5
Length=2876130
Score = 183 bits (202), Expect = 3e-41
Identities = 620/953 (65%), Gaps = 17/953 (2%)
Strand=Plus/Minus
Query 147466 GACGCCAGATTGCAGACGGCCGTCTCTTC-GGCGTCGCTGTACTGCACGATTTCGGCGCA 147524
|| || ||||||||||| || ||| || |||| | |||||| |||||||||| |||
Sbjct 2652465 GAAGCAAGATTGCAGACAGCAACCTCGTCTGGCGCAG-TGTACTCGACGATTTCGGTGCA 2652407
Query 147525 CAGGTT---GCTGCATTTTATGACTCCCAAATTTTGCTGATTGCTTTTCCGATTGCACGC 147581
|| || ||| | || | |||| || | ||| ||||| ||| ||||| ||
Sbjct 2652406 AAGATTTGAGCTCCGAATTGTC---CCCAGGTTCTTCTGGTTGCTCTTCTTGTTGCATGC 2652350
Query 147582 GTCTTTGAAGAGCATGTACGGTCCGCCGGTCTCGACTTGCGTTTCAACGATAAACCTATG 147641
|| ||| | ||||| ||||| ||||||||| ||| | ||||| ||| | ||
Sbjct 2652349 ATCCTTGTAAAGCATATACGGAGTACCGGTCTCGGTTTGTGCTTCAAGAATAG-CATACC 2652291
Query 147642 -CAGGTCCTGCGCTCGCACCCGCTGCCGATAGCGGCCCTCGTTTTCGTACCGCTCGTACA 147700
|| | ||| || | ||| ||| || ||||| ||||| || |||||||| |
Sbjct 2652290 ACAATTTCTGAGCCTTGATGGTCTGGCGACCACGTCCCTCCTTTTCATATCGCTCGTAGA 2652231
Query 147701 ACCGCTCAAACTCGTCGCCGTAGCAATCGGCAAGGCCGGGACACTGATGCGGACACATCA 147760
||||||||| ||||| ||| ||| ||||| || || || ||| || || | |
Sbjct 2652230 GAGCCTCAAACTCCTCGCCATAGACATCAGCAAGACCCGGTGCCTCATGAGGGCAGAAGA 2652171
Query 147761 GCGACCACATGTCGTCCGCGTTAACGCGTCGCATAAACAGATCCGGCACCCACAGCGCGT 147820
| | ||| | || | | ||||| | ||| ||||| || || ||| || || |
Sbjct 2652170 GGGTCCAGTCTTGGTTCTTCTCGACGCGGCTCATGAACAGGTCAGGAGTCCAGAGAGCAT 2652111
Query 147821 ACATAAGATCGCGCGCTTTGCAATCCTCGGCGCCCATGTTGCGTT-TCAAATTAAGCACG 147879
| | ||||| || || | || || ||| || | | || ||| || | | |
Sbjct 2652110 AGAACAGATCACGGGCACGGACTTCTTCTTTGCCG-TGATTCTTTCTCAGGTTCAAGAAG 2652052
Query 147880 CTATAGATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGCGCACCTTTACGCTTT--- 147936
| | | || ||||||||||| |||| ||||| ||| | ||||| |||||
Sbjct 2652051 TCAAAAACATCAGCGTGCCAGGGCTCAAGGTAGATGGCAAAAGCACCGGGGCGCTTGTTG 2651992
Query 147937 CCGCCCTGGTCGACATGGCGCACCATGTTGTTAAACACGCGCACCATGGGTTCCAGGCCG 147996
|| |||||||| |||| ||| | ||||||| || || || | |||||| |||||
Sbjct 2651991 CCACCCTGGTCAACATAGCGGGCAGTGTTGTTGAAGACACGAAGCATGGGGATGAGGCCA 2651932
Query 147997 CTCGCAGTGCCGTTGGTGGAATTGATCTTGCTGCCGCGGGCTCGCACTTCGTGCACGTTA 148056
||| ||||| || ||| || | |||| ||| || | ||| | ||
Sbjct 2651931 TTCGACGTGCCATTAGTGCCGGCAATGTATGAGCCGGTGGCACGAATGCAGTGAGCATTC 2651872
Query 148057 ACGCCAATGCCGCC-GCCGTACTTTGATATGGCAGCGCAATCGCCCAATGTCGTGTAGAT 148115
| || || ||||| || || ||| || || ||| ||| || || ||||||
Sbjct 2651871 AAACCGATACCGCCAGCAGT-CTTGGAGATCATAGCACAAGTCTTCAGCGTATCGTAGAT 2651813
Query 148116 GCCGTCGATGCTGTCGTTTTTGACGCCAAGCAAAAAACACGAACACATTTGCGGAATCCG 148175
|| || ||||||||| || | | | | || || || || ||| ||| || |
Sbjct 2651812 ACCCTCAATGCTGTCGGACTTCATGTCGATCAGGAAGCATGACGACAGTTGAGGTTGAGG 2651753
Query 148176 CGTTCCCGCCGAGAAAAGGGTGGGACTCGCGTGCGTAAACAATTTTTGACTCATCATGCG 148235
||||| || ||| | ||| || || || || || | || ||| ||| | | |
Sbjct 2651752 TGTTCCGGCGTTGAACAAGGTTGGCGAGGCATGAGTGAAGCACTTCTGAGACATGAGGTG 2651693
Query 148236 ATACGTCTCAATAGCGTCTTCGATGTCGTCGCCGTGAATGCCCAGCGCGACGCGCATGAG 148295
|||||||||| | | |||| || || ||||| ||||||| | ||| ||||||||
Sbjct 2651692 GTACGTCTCAAGCACCTTATCGACATCATCACCGTGGATGCCCACAGAGACACGCATGAG 2651633
Query 148296 CATGTGCTGTGGTCGTTCGGCAACTTGATTGTTGATCTTGAGAAGATATCCATTTTCGAG 148355
|||||| |||||||| || |||||||| ||| ||||| || |||||| |||| |
Sbjct 2651632 CATGTGTTGTGGTCGCTCAGCAACTTGCTTGCCAATCTTCAGCAGATATGATCTTTCCAA 2651573
Query 148356 GGTTTTGTAACCAAAGTACTTGTAATCAAAATCTAGCTCGTAAGCGATGGCCG 148408
|| ||| | ||||| || ||||| | || ||| | ||||| |||||||||
Sbjct 2651572 CGTCTTGAAGCCAAAATAGTTGTAGTTGAAGTCTCGGTCGTATACGATGGCCG 2651520
>seq1
Length=5022262
Score = 95.1 bits (104), Expect = 1e-14
Identities = 91/117 (78%), Gaps = 0/117 (0%)
Strand=Plus/Minus
Query 131914 AACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTC 131973
|||||| || | | | ||||| || ||||||||||||||||||| || || ||||||
Sbjct 2612002 AACCAAGTGCAAGGTCGACTCCTTCTGAATGTTGTAGTCGCTCAGAGTGCGGCCATCTTC 2611943
Query 131974 GAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATC 132030
||||| ||||| | |||| || ||||||||||| || || |||||||| || ||
Sbjct 2611942 AAGCTGCTTACCAGCGAAGATGAGGCGCTGTTGATCGGGGGGAATGCCTTCCTTGTC 2611886
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476610973609680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |