Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20spinifera_20[genbank_20GCA_5F001599535.1_202016-03-01] 38 sequences; 32,702,796 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq1 134 1e-26 seq3 105 7e-18 seq2 82.4 8e-11 >seq1 Length=5022262 Score = 134 bits (148), Expect = 1e-26 Identities = 168/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545 || |||| |||| ||| ||||| |||||||||||||| ||||| |||||||| || | Sbjct 2612475 CCACCTCGCAGTCTCAAGACGAGATGTAGCGTGGATTCTTTTTGGATGTTGTAATCTGAG 2612416 Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 | | | || | || || | || || |||||||| ||||| || || || ||||| || Sbjct 2612415 AGAGTTCTGCCA-TCTTCCAATTGCTTTCCTGCAAAGATCAATCGTTGTTGGTCGGGTGG 2612357 Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665 ||||||||||| |||||||| || || || ||| | |||||| || ||||| || Sbjct 2612356 GATGCCTTCTTTGTCTTGAATCTTGCTCTTTACGTTGTCGATTGTGTCTGAGGATTCAAC 2612297 Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||| || || ||||| || || | || || ||||| || ||||| Sbjct 2612296 TTCGAGTGTGATAGTTTTGCCCGTAAGGGTCTTGACGAAGATCTGCAT 2612249 Score = 113 bits (124), Expect = 5e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | || ||||| || |||||||| || || |||||||||||| Sbjct 2612247 CCACCACGGAGCCGGAGAACAAGGTGGAGAGTGGATTCTTTCTGGATGTTGTAGTCGGAG 2612188 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | |||| | ||| ||||| || ||||| || || |||| ||| || || || || || Sbjct 2612187 AGGGTGCGGCCGTCTTCGAGTTGCTTGCCGGCGAAGATCAGACGTTGTTGGTCAGGAGGA 2612128 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 ||||| || || || ||||| || || || ||| | ||||| || ||||| || Sbjct 2612127 ATGCCCTCCTTATCCTGAATCTTGGACTTCACGTTGTCGATGGTGTCTGAAGATTCGACC 2612068 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || ||||| || ||||| | || || || || |||||||| Sbjct 2612067 TCAAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACAAAGATTTGCAT 2612021 Score = 105 bits (116), Expect = 7e-18 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 |||| |||||| | || || ||| ||||||||| ||||||||||| | ||| | Sbjct 2612694 AGTCTCAACACCAAATGGAGAGTGCTTTCCTTTTGGATGTTGTAGTCAGACAGGGTACGG 2612635 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 || || | ||| ||||||||||| ||||| ||||| ||||| || || || || || Sbjct 2612634 CCATCCTCCAACTGCTTGCCTGCAAAGATCAATCGCTGTTGATCCGGGGGGATACCCTCC 2612575 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || ||||| || || |||||| ||| | || || || || || || || | |||| Sbjct 2612574 TTGTCTTGGATCTTCGATTTGACGTTGTCAATGGTATCAGATGACTCGACTTCCAAAGTA 2612515 Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || || || | ||| || || || || ||||| Sbjct 2612514 ATCGTCTTGCCCGTCAGAGTCTTGACAAAGATCTGCAT 2612477 Score = 82.4 bits (90), Expect = 8e-11 Identities = 122/173 (71%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 134517 GTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCT 134576 || || ||||| |||||||||||||||| | ||| | || || ||||| || || Sbjct 2611989 GTCGACTCCTTCTGAATGTTGTAGTCGCTCAGAGTGCGGCCATCTTCAAGCTGCTTACCA 2611930 Query 134577 GCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTG 134636 || || || | ||||| |||||||| || |||||||| || || || || || ||| Sbjct 2611929 GCGAAGATGAGGCGCTGTTGATCGGGGGGAATGCCTTCCTTGTCCTGGATCTTGGACTTG 2611870 Query 134637 ACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGT 134689 || ||| | || ||| ||||| || || || || ||||| || ||||| Sbjct 2611869 ACGTTGTCGATGGTATCGCTGGATTCGACCTCAAGGGTGATGGTCTTGCCGGT 2611817 >seq3 Length=3603273 Score = 105 bits (116), Expect = 7e-18 Identities = 132/181 (73%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 134524 CCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAA 134583 ||||||| ||||||||||||| | ||| | || ||||| || || || || |||| Sbjct 2486606 CCTTTTGGATGTTGTAGTCGCTCAGGGTTCGGCCATCCTCGAGTTGCTTTCCGGCGAAAA 2486665 Query 134584 TCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGT 134643 |||| ||||| |||||||| || || ||||| || ||||| || || ||||| || Sbjct 2486666 TCAATCGCTGTTGATCGGGAGGGATTCCTTCCTTGTCTTGGATCTTGGACTTGACGTTGT 2486725 Query 134644 CCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGA 134703 | | |||||||| || ||||| || || || ||||| || || || | || || |||| Sbjct 2486726 CGATGGTGTCGGATGACTCCACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGA 2486785 Query 134704 A 134704 | Sbjct 2486786 A 2486786 >seq2 Length=4816724 Score = 82.4 bits (90), Expect = 8e-11 Identities = 99/135 (73%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | |||||| | |||||||| || || || ||||| ||||||||||||||| | Sbjct 234646 CCACCACGGAGTCGGAGGACGAGGTGGAGGGTCGACTCCTTCTGAATGTTGTAGTCGGAA 234587 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| | || ||||| || ||||| || || |||| ||| || || || || || Sbjct 234586 AGAGTGCGGCCATCTTCGAGTTGCTTGCCGGCGAAGATCAGACGTTGTTGGTCAGGAGGA 234527 Query 134607 ATGCCTTCTTTTTCT 134621 || ||||| || ||| Sbjct 234526 ATTCCTTCCTTGTCT 234512 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505398159935760