Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20spinifera_20[genbank_20GCA_5F001599535.1_202016-03-01] 38 sequences; 32,702,796 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq5 102 6e-17 >seq5 Length=2876130 Score = 102 bits (112), Expect = 6e-17 Identities = 366/567 (65%), Gaps = 19/567 (3%) Strand=Plus/Plus Query 19232 AAGACATGCAAATTGGAGGATTGAGTAAAGAGTTTTCTGAAATCTTTCGTAGAGCATTTG 19291 |||| ||| |||||| ||| | ||||| ||| | ||| ||| | |||||||||| Sbjct 335710 AAGATATGGGAATTGGCGGACTAGACAAAGAATTTGCCACAATATTTAGAAGAGCATTTG 335769 Query 19292 TGTCGCGTGTTTTTTCTGCAGATGTCATTAAACAATTGGGATGTAAACATGTTCGTGGAC 19351 ||| ||||| || || | | | | | | | ||||| | |||||| || Sbjct 335770 CGTCTCGTGTCTTCCCTCCTGGTTTGGTCGAGAAGTTGGGCATCCAGCATGTTAAGGGTA 335829 Query 19352 TTTTGCTTTATGGGCCACCGGGTTGTGGAAAAACATTAATTGCGAGAGAACTTAGTAAAT 19411 | | || || || || || || ||||| ||||| || || ||| || || | ||| Sbjct 335830 TACTTCTATACGGCCCGCCTGGAACGGGAAAGACATTGATCGCCAGACAAATTGGCAAAA 335889 Query 19412 TACTTA---CAAAACAACCTCCCAAAATTGTAAATGGTCCTGAAATCTTAAATAAATATG 19468 | || | | | | ||||| ||| | | || ||||| ||| | || || ||||| | Sbjct 335890 TGCTGAACGCCAGAGAACCT---AAAGTCATTAACGGTCCCGAAGTATTGAACAAATACG 335946 Query 19469 TAGGTCAATCGGAAGAAAATGTACGACGTTTGTTTGCTGACGCTGAAGAAGAACAAAAAC 19528 | ||||| || ||||| || | || |||| || || || ||| ||| | | || Sbjct 335947 TGGGTCAGTCAGAAGAGAACATTCGGAAGCTGTTCGCAGATGCAGAA-AAGGAGTACAAG 336005 Query 19529 GTTTAGGGCGCAAAAGTTC--TTTGCACATTATAATACTAGATGAATTGGACGCAATCTG 19586 | | || | | ||| | |||||||||| || | |||||| |||| || |||| Sbjct 336006 GAGAAAGGTG-ATGAGTCTGGTCTGCACATTATCATCTTCGATGAACTGGATGCCGTCTG 336064 Query 19587 TAAGCAAAGAGG------TTC---TGGTGTAAATGGAGTACATGACACTGTTGTCAATCA 19637 || || ||||| | | ||||| | ||||| |||| ||| |||||||| Sbjct 336065 CAAACAGAGAGGAAGTGGTGCCGGTGGTGGTACCGGAGTGGGAGACAGTGTGGTCAATCA 336124 Query 19638 ACTCCTGTCAAAATTAGACGGTGTTAACCAACTGAATAATATTTTAGTTATTGGCATGAC 19697 || || || || | ||||| || ||||||| || || || || | ||||| ||||| Sbjct 336125 GCTGCTCTCGAAGCTGGACGGCGTGGACCAACTCAACAACATCTTGTTGATTGGTATGAC 336184 Query 19698 TAATAGACTGGAATTAATAGACAGCGCCTTATTACGACCCGGTCGGTTGGAAATAAAGAT 19757 || ||| || | || || || | ||||||||||||| ||||| | | | Sbjct 336185 CAACAGAAAAGACATGATCGATGATGCACTGCTACGACCCGGTCGTCTGGAAGTGCATTT 336244 Query 19758 CGAAATTAACTTACCCGATGAATGTGG 19784 || ||| |||||| |||||| |||| Sbjct 336245 GGAGATTGCCTTACCTGATGAAAGTGG 336271 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397455815928190