Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20spinifera_20[genbank_20GCA_5F001599535.1_202016-03-01] 38 sequences; 32,702,796 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq1 109 5e-19 seq5 93.3 4e-14 >seq1 Length=5022262 Score = 109 bits (120), Expect = 5e-19 Identities = 143/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 || || ||||| || || ||||||||| | | |||| |||||||||| || || ||| Sbjct 2612217 GTGGATTCTTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCTTCGAGTTGCTTGCCG 2612158 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 ||| | || ||||| ||||| || || || | ||||| ||||| |||||| ||| Sbjct 2612157 GCGAAGATCAGACGTTGTTGGTCAGGAGGAATGCCCTCCTTATCCTGAATCTTGGACTTC 2612098 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | | || | ||||||| | ||| || || || || || | ||||| || || || Sbjct 2612097 ACGTTGTCGATGGTGTCTGAAGATTCGACCTCAAGGGTGATGGTCTTGCCGGTGAGGGTC 2612038 Query 27231 TTCACAAAGATTTGCATA 27248 || ||||||||||||||| Sbjct 2612037 TTGACAAAGATTTGCATA 2612020 Score = 91.5 bits (100), Expect = 1e-13 Identities = 131/185 (71%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 ||||| || || || || || || ||||| ||||||||||||| |||| | ||||| Sbjct 2612001 ACCAAGTGCAAGGTCGACTCCTTCTGAATGTTGTAGTCGCTCAGAGTGCGGCCATCTTCA 2611942 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 ||||| ||||| ||| | ||||| ||||||||||| || || | || || || || | Sbjct 2611941 AGCTGCTTACCAGCGAAGATGAGGCGCTGTTGATCGGGGGGAATGCCTTCCTTGTCCTGG 2611882 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 |||||| || | | | || | || || ||| ||| || || || || || | ||| Sbjct 2611881 ATCTTGGACTTGACGTTGTCGATGGTATCGCTGGATTCGACCTCAAGGGTGATGGTCTTG 2611822 Query 27219 CCCGT 27223 || || Sbjct 2611821 CCGGT 2611817 Score = 87.8 bits (96), Expect = 2e-12 Identities = 147/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 27035 CAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTC 27094 ||| |||||||| | || || ||||| || |||||||| || | | || | || Sbjct 2612689 CAACACCAAATGGAGAGTGCTTTCCTTTTGGATGTTGTAGTCAGACAGGGTACGGCCATC 2612630 Query 27095 TTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATC 27154 || | ||| || || || | || | |||||||||||||| || | |||||| || || Sbjct 2612629 CTCCAACTGCTTGCCTGCAAAGATCAATCGCTGTTGATCCGGGGGGATACCCTCCTTGTC 2612570 Query 27155 GGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGA 27214 |||||| ||| | | | || | || || | | || ||||| | ||| || | Sbjct 2612569 TTGGATCTTCGATTTGACGTTGTCAATGGTATCAGATGACTCGACTTCCAAAGTAATCGT 2612510 Query 27215 TTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 |||||||||||||| || |||||||| ||||| Sbjct 2612509 CTTGCCCGTCAGAGTCTTGACAAAGATCTGCAT 2612477 >seq5 Length=2876130 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/230 (69%), Gaps = 3/230 (1%) Strand=Plus/Minus Query 130753 ATTAATGATTTGAAAATCACCAGCCAGGACGCGTCTAACGTAAATGTTGCTCGTGAACGG 130812 ||| | |||||| || || ||||||| || |||| | ||| ||||| |||| | || Sbjct 2653039 ATTGACGATTTGGAATTCGCCAGCCAATACACGTCGAGAGTAGATGTTTGACGTGTATGG 2652980 Query 130813 TTCAAAGGATTCGTTGTTGCCGAATATTTGTGCTGTAGTTGCGGTGGGCATGTATGCCAC 130872 || ||| |||||||||| || || || || | ||| | ||| ||||||||| || || Sbjct 2652979 CTCGAAGCATTCGTTGTTACCCAAGATCTGAGATGTGGATGCAGTGGGCATGGGAGCAAC 2652920 Query 130873 TAATAGAGAATTACGAAGACCGTGCGTCGTGATTTTTCGCTTCAATTCATCCCAATCCCA 130932 | ||||| || || | ||| ||| | | |||| ||||| ||||| ||||| Sbjct 2652919 AAGAAGAGAGTTGCGGACACCATGCTTTGCAATTTCAGCCTTCAGGCTGTCCCAGTCCCA 2652860 Query 130933 TAGAGAGGTAGGTTTGACATTGTTCCACATATCAAATTGTAGTATGCCTT 130982 || || || | ||||| |||||||||| |||| || | ||||| Sbjct 2652859 CAGGTCTGTCGGAGTAACATT---CCACATATCATATTGAAGGACGCCTT 2652813 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424934203202256