Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20spinifera_20[genbank_20GCA_5F001599535.1_202016-03-01] 38 sequences; 32,702,796 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq5 208 1e-48 >seq5 Length=2876130 Score = 208 bits (230), Expect = 1e-48 Identities = 902/1402 (64%), Gaps = 47/1402 (3%) Strand=Plus/Minus Query 110707 GTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGA 110766 ||||||||||| |||||||| || |||||||| || ||||||||||| || | ||||| Sbjct 2653000 GTAGATGTTTGACGTGTATGGCTCGAAGCATTCGTTGTTACCCAAGATCTGAGATGTGGA 2652941 Query 110767 GGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTG--ATGCGT 110824 || || ||||| || || | | |||| ||| || | ||| | || ||| || Sbjct 2652940 TGCAGTGGGCATGGGAGCAACAAGAAGAGAGTTGCGGACACCATGCT--TTGCAATTTCA 2652883 Query 110825 TCCTTGAGAACATCCCAGTCGTA--GTTGAGCTTGGTTTCACCTTCCCACATGTCAAACT 110882 |||| || |||||||| | | | | | || | || |||| |||| ||| | | Sbjct 2652882 GCCTTCAGGCTGTCCCAGTCCCACAGGTCTG-TCGGAGTAACATTCC-ACATATCATATT 2652825 Query 110883 GAAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAG 110942 |||| || |||||||| | ||| |||||| | || | ||| | ||||| | | | Sbjct 2652824 GAAGGACGCCTTGGGAGACTGGACTGCCCTCATATGTCTGATAAGGGCCTTGCTCCTTGG 2652765 Query 110943 CCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCA 111002 | | || || || || || |||||||| ||||| || ||||| | || | Sbjct 2652764 CGAGCTCGCATGAGGCTGTCAAGGCGGCGTGATAGATGGTCTCGAAGATCTGGATGTTGA 2652705 Query 111003 TCTCCTTGGCTTCATCTGAATCAAATG-----CGTAGCGGCACAAAATAAATACATCCGC 111057 || |||||| || ||||| | || || |||| | || |||| || Sbjct 2652704 GCTGTCGGGCTTCCGGCGAGTCAAAAGGCAGACGAAG-GGCA----AGGAAAGCATCTGC 2652650 Query 111058 GAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTC 111117 |||||||| ||||| | |||||| |||| ||||||||| || | ||| | | ||| Sbjct 2652649 CAGACCTTGTACACCGAGACCAATTGGTCGGTGTCGCATGTT-GCTGTTCTTG--GCCTC 2652593 Query 111118 ---AACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGT 111174 ||| ||||| | || |||| || | | ||| | || ||| || | | || Sbjct 2652592 GGGAACAGGATAGTAGTTGATGTCGATAATTTTGTTCAAGTTGCGGGTGACGACTTGAGT 2652533 Query 111175 GATTTCATGAAGTTTTTCATAATCAAA---AGTGCGAGTCTCTTCATTGACATACTTTGG 111231 | || || || | | ||| | | ||| | ||| | |||| | | || Sbjct 2652532 AACCTCGTGGAGACGACCGAAGTCATATTCACCGCGGG---CTTGGTCGACAAAGGTCGG 2652476 Query 111232 AAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAAT 111291 ||||| | || || | |||||| ||||| ||| || | |||||||| | || Sbjct 2652475 CAGGGCCAGCGAAGCAAGATTGCAGACAGCAACCTCGTCTGGCGCAGTGTACTCGACGAT 2652416 Query 111292 TTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTT 111351 ||| || || | || || ||| ||| ||||||| ||||| ||||| ||||||||||| Sbjct 2652415 TTCGGTGCAAAGATTTGAGCTCCGAATTGTCCCCAGGTTCTTCTGGTTGCTCTTCTTGTT 2652356 Query 111352 GCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGC 111411 ||| ||||||||||| ||||| || || || || ||||| || |||| || |||||||| Sbjct 2652355 GCATGCATCCTTGTAAAGCATATACGGAGTACCGGTCTCGGTTTGTGCTTCAAGAATAGC 2652296 Query 111412 CTTCCA-AACATCGGCGGC-TGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTT 111469 | ||| || || | | | || | ||||| | ||||||||| || || Sbjct 2652295 ATACCACAATTTCTGAGCCTTGATGGTCTGGCG--ACCACGTCCCTCCTTTTCATATCGC 2652238 Query 111470 GTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGA 111529 |||||| || ||||||||||| || | || | ||||| ||||||| | || Sbjct 2652237 TCGTAGAGAGCCTCAAACTCCTCGCCATAGACATCAGCAAGACCCGGTGCCTCATGAGGG 2652178 Query 111530 CAGAAAAGAGACCATTGACCACCTTC--CTCAACCCGCTTCATGAAAAGGTCTGGAATCC 111587 ||||| || | ||| | | ||| ||| || || ||||||| ||||| ||| ||| Sbjct 2652177 CAGAAGAGGGTCCA--GTCTTGGTTCTTCTCGACGCGGCTCATGAACAGGTCAGGAGTCC 2652120 Query 111588 ACAGGGATGAAAAGAGATCTC-TACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAAC 111646 | || | | || ||||| | ||| || | ||||| | || || || || | Sbjct 2652119 AGAGAGCATAGAACAGATCACGGGCACGGA-CTTCTTCTTTGCCGTGATTCTTTCTCAGG 2652061 Query 111647 TCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC---- 111702 | | ||| || | | ||| |||||||| |||||||| |||| || | || || Sbjct 2652060 TTCAAGAAGTCAAAAACATCAGCGTGCCAGGGCTCAAGGTAGATGGCAAAAGCACCGGGG 2652001 Query 111703 CTTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGG 111762 | | | | ||| | || | |||||||| || ||| ||| || || |||||||| || Sbjct 2652000 CGCTTGTTG-CCACCCTGGTCAACATAGCGGGCAGTGTTGTTGAAGACACGAAGCATGGG 2651942 Query 111763 AATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATC 111822 || | |||| || ||||| || || ||| || |||| | | Sbjct 2651941 GATGAGGCCATTCGACGTGCCATTAGTGCCGGCAATGTATGAGCCGGTGGCACGAATGCA 2651882 Query 111823 ATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGT 111882 || | || || ||||| ||||| ||| ||||| ||||| | | || || Sbjct 2651881 GTGAGCATTCAAACCGATACCGCCAGCAGTCTTGGAGATCATAGCACAAGTCTTCAGCGT 2651822 Query 111883 TCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTG 111942 | |||||||| | || ||| ||| || |||| |||||||| |||| || Sbjct 2651821 ATCGTAGATACCCTCAATGCTGTCGGACTTCATGTCGATCAGGAAGCATGACGACAGTTG 2651762 Query 111943 CGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAA-CATACCTTGGG 112001 ||| ||||| || || ||||| | |||||| | || ||| |||| || | || | Sbjct 2651761 AGGTTGAGGTGTTCCGGCGTTGAACAAGGTTGGCGAGGCATGAGTGAAGCACTTC-TGAG 2651703 Query 112002 ACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGA 112061 |||| || ||| ||||| | || ||| | || || ||||||||||| | | || Sbjct 2651702 ACATGAGGTGGTACGTCTCAAGCACCTTATCGACATCATCACCGTGGATGCCCACAGAGA 2651643 Query 112062 CCCGCATGAACATGTACTGTGG 112083 | ||||||| ||||| ||||| Sbjct 2651642 CACGCATGAGCATGTGTTGTGG 2651621 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628031701684800