Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20spinifera_20[genbank_20GCA_5F001599535.1_202016-03-01] 38 sequences; 32,702,796 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq4 244 3e-59 seq7 168 2e-36 seq1 150 5e-31 seq2 104 7e-17 >seq4 Length=3308965 Score = 244 bits (270), Expect = 3e-59 Identities = 957/1501 (64%), Gaps = 73/1501 (5%) Strand=Plus/Minus Query 349202 ATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGTGTA 349261 ||||| |||||| | ||||| || || || ||||| | | | | | |||| || | Sbjct 495859 ATAGGTATCGATCTGGGTACAACCTACTCGTGTGTAGGCATCTTCCGAGATGACCGCATC 495800 Query 349262 GAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACCGAA 349321 ||||| ||||| ||||| ||||| ||| ||||||| || || | ||| || || || || Sbjct 495799 GAAATCATTGCCAATGACCAAGGCAACCGAACAACTCCCTCCTTCGTGGCCTTCACAGAC 495740 Query 349322 ACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAATACG 349381 || |||||| | ||||||||| ||||||| || |||| ||| || || || || Sbjct 495739 ACCGAGCGTCTCATTGGTGATGCTGCAAAGAACCAAGTCGCTATGAACCCTGCCAACACT 495680 Query 349382 GTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGA--CAAATCTACACAATCTG 349439 ||||| || || |||||| | ||||| | | || ||| | | | || ||| Sbjct 495679 GTTTTCGACGCCAAGCGATTGATTGGCCGGAAATTCAGTGATGCTGAGGTTCAGG--CTG 495622 Query 349440 ATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATTGAGG 349499 | | || ||||| || || | || | | | ||| || | |||||| | ||||| | Sbjct 495621 ACATGAAGCATTTCCCCTTCAAGGTCAT-CGACAAG--GGCGGCAAACCAGTCATTGAAG 495565 Query 349500 TTGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGTTTTAG 349559 | |||| || || ||| ||||||||| ||| ||||| || || || ||||| || Sbjct 495564 TCGAATTCAAGGGCGAAACAAAACAATTCACACCAGAAGAGATCTCCTCGATGGTCTTGA 495505 Query 349560 TTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTATTA 349619 || |||| || | |||||| ||||| | || | || || | | || || | | Sbjct 495504 CAAAGATGAGAGAGACCGCTGAATCATATCTCGGCGGCACTGTCAACAACGCCGTCGTCA 495445 Query 349620 CTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCATTG 349679 | || || ||||| || || || || | || |||||||| || ||| ||||| Sbjct 495444 CAGTCCCTGCCTACTTCAACGACAGTCAAAGACAGGCCACAAAAGACGCCGGCCTCATTG 495385 Query 349680 CGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGGGC 349739 | || | || || || | || || || |||||||| || || || ||||| ||||| | Sbjct 495384 CCGGTCTCAACGTCCTCCGTATCATCAACGAACCCACCGCAGCTGCCATTGCCTATGGTC 495325 Query 349740 TTGATAAAATGAG---TGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTA 349796 ||||||| | || || | || ||| | || || || ||| | |||||||||| Sbjct 495324 TTGATAAGAAGACCACTGGC---GAGCGCAATGTCCTCATCTTCGATCTTGGTGGTGGTA 495268 Query 349797 CTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTG 349856 | || ||||| || || | || | |||||||| || |||||||| || | || |||| Sbjct 495267 CCTTCGATGTCTCCCTCTTGACCATCGAAGAGGGTATCTTTGAAGTCAAGTCGACCGCTG 495208 Query 349857 GTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTTAAAG 349916 ||||||| || | ||||| || || || || |||||||| || || || || || | Sbjct 495207 GTGATACTCACTTGGGTGGTGAGGACTTCGACAATCGTCTGGTCAACCACTTCGTGAATG 495148 Query 349917 AATTTAAGCGTCAAGCTA------AAATTGAT-----------ATTG--GA--------- 349948 |||| |||||| ||| || | ||||| |||| || Sbjct 495147 AATTCAAGCGT-AAGTTACCTCCTACCTTGATCTACTATAGCAATTGCTGACTTGACCCA 495089 Query 349949 -GATAA------------------TCCTA-----GAGCAATGCGTCGCCTAAGAACTGCG 349984 || || ||| | | || | || || || |||| || Sbjct 495088 GGAAAACATAAAAAAGACTTGAGCTCCAACTCCCGTGCTCTTCGACGTCTCCGAACCGCT 495029 Query 349985 TGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCTCTATTGAAATTGATTCT 350044 || || ||||| ||||| || | || || | | || ||||| ||||| || || || Sbjct 495028 TGCGAGCGTGCCAAGCGCACCCTTTCCTCCTCAGCTCAGACCTCCATTGAGATCGACTCG 494969 Query 350045 CTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTCGGTTTGAAGAATTATGT 350104 || ||| |||| ||||||| | || || || |||||||| || || ||| | || Sbjct 494968 CTGTATGAGGGCATCGATTTCTACACCTCCATCACTCGTGCTCGTTTCGAGGAACTCTGC 494909 Query 350105 ATGGATCTTTTTAGAGCAACAATGGATCCTGTGGAAAAAGTATTAAAAGATGCAAAAAT- 350163 ||| || || | | || ||||| || || || || | || || || || Sbjct 494908 CAGGACCTCTTCCGCTCCACCATGGAGCCAGTCGAGCGTGTCCTGCGCGACGCCAAGATC 494849 Query 350164 GTCCAAAAATCAGATTGATGAAGTAGTTTTAGTTGGTGGTTCTACACGTATTCCAAAAGT 350223 | | | || | || | || | ||||| || ||||||||||| ||||| || | | | Sbjct 494848 GACAAGTCCTCCG-TTCACGAGATCGTTTTGGTGGGTGGTTCTACCCGTATCCCCAGAAT 494790 Query 350224 TCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAACCTTCTAGATCAATTAATCCAGA 350283 || || | | || || || || || ||||| || || | || || || || || Sbjct 494789 CCAGAAGCTCGTCTCCGACTTCTTCAACGGCAAGGAGCCCAACAAGTCGATCAACCCTGA 494730 Query 350284 TGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCATCTATTTTATCTGGAAATAAGAGTTC 350343 || ||||| || || |||||||| || ||||| |||| | ||||| ||| || Sbjct 494729 CGAGGCTGTCGCCTACGGTGCTGCCGTCCAGGCCGCTATCCTGTCTGGTGATACCTCATC 494670 Query 350344 TAAAATTGA----TGATCTATTACTACTAGATGTAACTCCACTTTCGCTTGGATTAGAAA 350399 || | || || | || || || || || |||| || || | || | || | Sbjct 494669 -CAAGTCGACCAGCGAAATCTTGCTCCTCGACGTTGCTCCGCTGTCCATCGGTATCGAGA 494611 Query 350400 CTTCTGGTGAAGTAATGACTGTTCTTATTCCTAGAAATAGTACTGTACCTACAAAAAAGT 350459 || |||||| || |||||| | | || ||||| | || | || || || |||| Sbjct 494610 CTGCTGGTGGTGTCATGACTCCTTTGATCAAGAGAAACACCACCATTCCAACCAAGAAGT 494551 Query 350460 CCCAAACTTTTTCTACATTTGCAGATAATCAGCCAGCGGTAACAATTCAAGTATTTGAAG 350519 || |||| || || || || | || || || || | || |||||||| | || | Sbjct 494550 CCGAAACATTCTCGACTTTCTCCGACAACCAACCTGGTGTGCTCATTCAAGTCTACGAGG 494491 Query 350520 GTGAACGTGCTCGCACTAAAGATAATAATAAACTTGGAGAATTTACCCTAAGTGAAATTC 350579 |||| ||||||||||| || || || || || || | ||| | || |||| Sbjct 494490 GTGAGCGTGCTCGCACCAAGGACAACAACCTGCTCGGCAAGTTTGAATTGTCTGGCATTC 494431 Query 350580 CACCAATGCCTAGAGGAGTTCCTCAGATTGAAGTCTCTTTCGATATTGATTCAAATGGTA 350639 | || ||| | || || ||||| || || || | |||||| | ||| | || |||| Sbjct 494430 CTCCTGCTCCTCGTGGTGTGCCTCAAATCGAGGTTACCTTCGATGTCGATGCCAACGGTA 494371 Query 350640 T 350640 | Sbjct 494370 T 494370 Score = 95.1 bits (104), Expect = 4e-14 Identities = 217/327 (66%), Gaps = 0/327 (0%) Strand=Plus/Minus Query 378120 ATCAAATCCATCATCTCCATATGAGAATTGAACAATTTTATCTTTATTGTTTCTTACAGT 378179 ||||| ||||| || || || |||||||||||| || | || || || || Sbjct 2932431 ATCAAGGCCATCTTCGCCGTAAAGGAATTGAACAATGTTGCCACGGGAGTCTCGAACGGT 2932372 Query 378180 CATATCATATCTAACCATTAAATCTTCTAATGCTTTAATAAGTCGTCGAGAAATATAACC 378239 |||||||| | || | | ||||| | ||||| | ||||| || ||| || || Sbjct 2932371 GGTATCATATTTCACAGTCACTTCTTCAAGCGCTTTGACGAGTCGGCGCTGAATGTAGCC 2932312 Query 378240 AGTTTGACTAGTTTTAACTGCAGTATCAATTAAACCAACACGACCACCCATTGCATGGAA 378299 |||| ||| || || || ||||| || | ||| |||||||| |||| || ||||| Sbjct 2932311 GGTTTCGGCAGTCTTGACAGCTGTATCGATCAGACCTTCACGACCAGCCATGGCGTGGAA 2932252 Query 378300 GAATAATTCAGTAGGAGTAAGTCCACCAATAAATGAACTCTCAATAAATCCTCTTGCGCC 378359 ||| |||||||| ||||| || || | || | | || | || | || |||| | Sbjct 2932251 GAAGAATTCAGTGGGAGTCAGGCCTCGAAGATAGGAGTTTTCGACGAAGCCTCGAGACGG 2932192 Query 378360 TGGCGAATCATCATATTTTGTATAATGAGGTAATGTACGATTCTCAAACCCATATGGAAT 378419 || ||| | ||| | ||| | |||| || | ||||||| || || || | ||||| Sbjct 2932191 TGCCGAGTAATCGTCTTTGGCGAAATGCGGCAGAGTACGATACTTGAAACCGAAGGGAAT 2932132 Query 378420 TCGTTTTCCATCAACATTCTGTTGACC 378446 || || || || || ||| ||||| Sbjct 2932131 ACGCTTACCCTCCACGGCCTGCTGACC 2932105 >seq7 Length=2248210 Score = 168 bits (186), Expect = 2e-36 Identities = 252/357 (71%), Gaps = 3/357 (1%) Strand=Plus/Plus Query 349532 CCCGAAGAAATTTCATCAATGGTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTA 349591 |||||||||||||| | ||||| || | || ||||||||| | || |||||||| || Sbjct 911256 CCCGAAGAAATTTCCGCCATGGTATTGGGCAAGATGAAGGAAGTCGCAGAAGCATACTTG 911315 Query 349592 GGTGAAACAGTAACTGATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGT 349651 || | | ||| || |||| ||| | || || || ||||| || || ||||||||| | Sbjct 911316 GGCAAGAAAGTTACCCATGCCGTTGTCACGGTGCCGGCCTACTTCAACGATGCCCAGAGA 911375 Query 349652 TCTGCAACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAA 349711 ||||||||||| ||||| | || || || | | ||||| | || | |||||| Sbjct 911376 CAAGCAACAAAAGACGCTGGGACGATCGCTGGTCTGACGGTTCTCCGTGTGGTCAATGAA 911435 Query 349712 CCCACTGCTGCAGCAATTGCATATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATT 349771 || || ||||| || || || || || || || || || | | |||| | | || Sbjct 911436 CCAACGGCTGCTGCCATCGCCTACGGACTCGACAA---GAAGGGCAAAGAGAGCCAAATC 911492 Query 349772 CTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGA 349831 | | | ||| | ||||| |||||||| ||||| || || || || ||||||| || Sbjct 911493 ATCGTCTACGATCTTGGTGGCGGTACTTTCGATGTCTCCCTCCTTTCAATTGAAGATGGC 911552 Query 349832 ATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGAT 349888 |||| || || || ||||| |||||||| ||||| ||||| |||||||| ||| Sbjct 911553 GTTTTCGAGGTCTTGGCCACTGCCGGTGATACTCATCTCGGTGGTGAAGATTTCGAT 911609 >seq1 Length=5022262 Score = 150 bits (166), Expect = 5e-31 Identities = 172/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | |||||||| || ||||| || ||||| || || || || || Sbjct 2612251 CATACCACCACGGAGCCGGAGAACAAGGTGGAGAGTGGATTCTTTCTGGATGTTGTAGTC 2612192 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | || || || ||||| ||||| || || || ||||| |||||||| || ||||| Sbjct 2612191 GGAGAGGGTGCGGCCGTCTTCGAGTTGCTTGCCGGCGAAGATCAGACGTTGTTGGTCAGG 2612132 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 |||||| || || ||||||||||| || | || || || || || | || || | ||| Sbjct 2612131 AGGAATGCCCTCCTTATCCTGAATCTTGGACTTCACGTTGTCGATGGTGTCTGAAGATTC 2612072 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || ||||| || | ||||| ||||| || || || ||||| || ||||| Sbjct 2612071 GACCTCAAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACAAAGATTTGCAT 2612021 Score = 102 bits (112), Expect = 2e-16 Identities = 155/218 (71%), Gaps = 2/218 (1%) Strand=Plus/Minus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| |||||| ||||| | | ||||| | || | || ||||| || ||||| || | Sbjct 2612027 TTTGCATACCGCCACGAAGACGAAGAACCAAGTGCAAGGTCGACTCCTTCTGAATGTTGT 2611968 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 | || | || || ||||||||||| || || ||||| ||||| || || || |||| Sbjct 2611967 AGTCGCTCAGAGTGCGGCCATCTTCAAGCTGCTTACCAGCGAAGATGAGGCGCTGTTGAT 2611908 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682 | || ||||| ||||| || ||||| || || | || || || || || | ||| | || Sbjct 2611907 CGGGGGGAATGCCTTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTATC-GCTG 2611849 Query 140683 G-TTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGT 140719 | ||| || ||||| || | ||||| ||||| | ||| Sbjct 2611848 GATTCGACCTCAAGGGTGATGGTCTTGCCGGTGACTGT 2611811 >seq2 Length=4816724 Score = 104 bits (114), Expect = 7e-17 Identities = 104/135 (77%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 140510 ACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGA 140569 ||||||||| | || || || || || || || ||||| || ||||| || || || || Sbjct 234647 ACCACCACGGAGTCGGAGGACGAGGTGGAGGGTCGACTCCTTCTGAATGTTGTAGTCGGA 234588 Query 140570 TAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGG 140629 | || || |||||||| ||||| || || || ||||| |||||||| || |||||||| Sbjct 234587 AAGAGTGCGGCCATCTTCGAGTTGCTTGCCGGCGAAGATCAGACGTTGTTGGTCAGGAGG 234528 Query 140630 AATTCCTTCTTTATC 140644 ||||||||| || || Sbjct 234527 AATTCCTTCCTTGTC 234513 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515253662260514