Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20spinifera_20[genbank_20GCA_5F001599535.1_202016-03-01] 38 sequences; 32,702,796 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq1 170 2e-37 seq3 129 7e-25 seq5 122 1e-22 seq2 93.3 5e-14 >seq1 Length=5022262 Score = 170 bits (188), Expect = 2e-37 Identities = 174/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||||||||||||||| || ||||||||||| || || |||||||| || || Sbjct 2612021 ATGCAAATCTTTGTCAAGACCCTCACCGGCAAGACCATCACCCTTGAGGTCGAATCTTCA 2612080 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | || ||||| | || |||||||| |||||||| |||||||| ||||| Sbjct 2612081 GACACCATCGACAACGTGAAGTCCAAGATTCAGGATAAGGAGGGCATTCCTCCTGACCAA 2612140 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || ||||| || || || || ||||||||||| || | || ||||| | ||||| || Sbjct 2612141 CAACGTCTGATCTTCGCCGGCAAGCAACTCGAAGACGGCCGCACCCTCTCCGACTACAAC 2612200 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| || ||||||||||| || || || | || || || ||||| Sbjct 2612201 ATCCAGAAAGAATCCACTCTCCACCTTGTTCTCCGGCTCCGTGGTGG 2612247 Score = 158 bits (174), Expect = 1e-33 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||||||||| || || |||||||| |||||| | || || |||||| | Sbjct 2612477 ATGCAGATCTTTGTCAAGACTCTGACGGGCAAGACGATTACTTTGGAAGTCGAGTCATCT 2612536 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| ||||| || | || | || || || ||||||||||| || || || || || Sbjct 2612537 GATACCATTGACAACGTCAAATCGAAGATCCAAGACAAGGAGGGTATCCCCCCGGATCAA 2612596 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| | || ||||| || ||||| | ||||||| |||||||| | ||||| || Sbjct 2612597 CAGCGATTGATCTTTGCAGGCAAGCAGTTGGAGGATGGCCGTACCCTGTCTGACTACAAC 2612656 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 ||||||||||| |||||| ||| | || ||| | ||||| || || Sbjct 2612657 ATCCAAAAGGAAAGCACTCTCCATTTGGTGTTGAGACTTCGTGGCGG 2612703 Score = 109 bits (120), Expect = 6e-19 Identities = 148/204 (73%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 27430 ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCT 27489 ||||||||||| || || |||||||| || || | |||| ||| | || | ||| | Sbjct 2611817 ACCGGCAAGACCATCACCCTTGAGGTCGAATCCAGCGATACCATCGACAACGTCAAGTCC 2611876 Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549 || || ||||||||||| || ||||| || || || ||||| || || || ||||||||| Sbjct 2611877 AAGATCCAGGACAAGGAAGGCATTCCCCCCGATCAACAGCGCCTCATCTTCGCTGGTAAG 2611936 Query 27550 CAACTCGAGGATGATCGTACCCT-AGCAGACTATAATGTCCAAAAGGAATCCACTCTTCA 27608 || || || |||| || || || ||| ||||| || | || ||||| || || | || Sbjct 2611937 CAGCTTGAAGATGGCCGCACTCTGAGC-GACTACAACATTCAGAAGGAGTCGACCTTGCA 2611995 Query 27609 TCTAGTCTTGCGTCTTCGCGGTGG 27632 | || | |||||||| || || Sbjct 2611996 CTTGGTTCTTCGTCTTCGTGGCGG 2612019 >seq3 Length=3603273 Score = 129 bits (142), Expect = 7e-25 Identities = 140/183 (77%), Gaps = 2/183 (1%) Strand=Plus/Minus Query 27414 CTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCAT 27473 ||| |||||||| || || |||||||| || || |||||||| |||||| || | ||| Sbjct 2486787 CTTCGTCAAGACCCTCACGGGCAAGACCATCACCCTTGAGGTGGAGTCATCCGACACCAT 2486728 Query 27474 TGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCT 27533 | || | ||| | || || || |||||||| ||||| ||||| || || ||||| | Sbjct 2486727 CGACAACGTCAAGTCCAAGATCCAAGACAAGGAAGGAATCCCTCCCGATCAACAGCGATT 2486668 Query 27534 AATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAATGTCCAAA 27592 ||||| || || |||||||||||||||| || ||||| ||| ||||| || |||||| Sbjct 2486667 GATTTTCGCCGGAAAGCAACTCGAGGATGGCCGAACCCTGAGC-GACTACAACATCCAAA 2486609 Query 27593 AGG 27595 ||| Sbjct 2486608 AGG 2486606 >seq5 Length=2876130 Score = 122 bits (134), Expect = 1e-22 Identities = 649/1030 (63%), Gaps = 15/1030 (1%) Strand=Plus/Minus Query 80725 TCAGCCAGGCCCTGAACGCCGATGGCGATCGGGCGGTGGCGCTTGTTCGATCGCTCGGCC 80784 || ||||| || || || |||| | || || ||||| ||| |||| || |||| Sbjct 2652654 TCTGCCAGACCTTGTACACCGAGACCAATTGGTCGGTGTCGCATGTTGCTGTTCTTGGCC 2652595 Query 80785 TCCGGAATTGGGTAAAAGTTATTATCGATGACGCGGTTCAGGTTGCGTGTAACAACCCGT 80844 || |||| || || |||| | ||||| | ||||| |||||| || || || | Sbjct 2652594 TCGGGAACAGGATAGTAGTTGATGTCGATAATTTTGTTCAAGTTGCGGGTGACGACTTGA 2652535 Query 80845 GTAACATCATGAAGTTTCTGAAAGTCGAATTGGTTCCC--CTTC----ACAAATGCCGGA 80898 ||||| || || || ||||| ||| | ||| ||||| | ||| Sbjct 2652534 GTAACCTCGTGGAGACGACCGAAGTCATATTCACCGCGGGCTTGGTCGACAAAGGTCGGC 2652475 Query 80899 AGGCTCAGGGACGCCAGATTGCACACGGCCACCTCTTCAGCATCTGTAAACTCGACGATT 80958 ||| ||| || || |||||||| || || ||||| || | | || ||||||||||| Sbjct 2652474 AGGGCCAGCGAAGCAAGATTGCAGACAGCAACCTCGTCTGGCGCAGTGTACTCGACGATT 2652415 Query 80959 TCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTGACTTGGCGTTG 81018 || ||||| | ||| || | |||||| |||||||| |||||||| ||| |||| Sbjct 2652414 TCGGTGCAAAGATTTGAGCTCCGAATTGTCCCCAGGTTCTTCTGGTTGCTCTTCTTGTTG 2652355 Query 81019 CAAGCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACTTGAGGATGGCG 81078 || || |||||||| ||| ||||| |||||||||||| |||| | || || || Sbjct 2652354 CATGCATCCTTGTAAAGCATATACGGAGTACCGGTCTCGGTTTGTGCTTCAAGAATAGCA 2652295 Query 81079 TCCCA-AATCTCGCGCGCCTTGACCACCTTGCGGAATTTGCCTTCGGCCACATACTTGGC 81137 | ||| ||| || | ||||||| || ||| || || |||| | Sbjct 2652294 TACCACAATTTC-TGAGCCTTGATGGTCTGGCGACCACGTCCCTCCTTTTCATATCGCTC 2652236 Query 81138 GTAAGCTTCGTCGAACTTGGCACCGTGAAGTTCAGTGAGGTCTGGGCACTCGTTAGGGCA 81197 ||| | || |||| | || | | |||| || | || ||| | |||||| Sbjct 2652235 GTAGAGAGCCTCAAACTCCTCGCCATAGACATCAGCAAGACCCGGTGCCTCATGAGGGCA 2652176 Query 81198 CATCAGGTGCCAGTCGGTGTCGTTCTCTACAGCCTTCATGAAAGCGTCAGGGATCCAGAG 81257 | ||| |||||| || ||||| || ||||||| |||||| ||||||| Sbjct 2652175 GAAGAGGGTCCAGTCTTGGTTCTTCTCGACGCGGCTCATGAACAGGTCAGGAGTCCAGAG 2652116 Query 81258 GGCGGTGAACAGGTCGCGGCAGCGCGCCTCCTCATCACCCTGGTTGAGGCGCAACTCGAG 81317 || |||||| || ||| || | || || | || || || | || | | Sbjct 2652115 AGCATAGAACAGATCACGGGCACGGACTTCTTCTTTGCCGTGATTCTTTCTCAGGTTCAA 2652056 Query 81318 AAAGTCCATGATGTCCGCATGCCATGGCTCCAGATACACGGCGATCGACCCCTTGCG--- 81374 ||||| | | || || ||||| ||||| || || | ||| | | || ||| Sbjct 2652055 GAAGTCAAAAACATCAGCGTGCCAGGGCTCAAGGTAGATGGCAAAAGCACCGGGGCGCTT 2651996 Query 81375 ACGGCCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACACGCAACATAGGGATGAT 81434 ||||||||||| || || |||||||| ||| || ||||| | ||| ||||||| Sbjct 2651995 GTTGCCACCCTGGTCAACATAGCGGGCAGTGTTGTTGAAGACACGAAGCATGGGGATGAG 2651936 Query 81435 ACCATCTGACTGACCGTTCGTACCCACGATACGCGACCCCTTGGCGCGCA--CCTTGCTG 81492 |||| ||| || || || || | || || || |||| || | | || Sbjct 2651935 GCCATTCGACGTGCCATTAGTGCCGGCAATGTATGAGCCGGTGGCACGAATGCAGTGAGC 2651876 Query 81493 ATTGAAAGACCGATGCCACCTGACCACTTTGAAATCTGAGCACACCGGTTCATGGTCTCA 81552 ||| || |||||| || || | ||| || ||| |||||| |||| || || Sbjct 2651875 ATTCAA--ACCGATACCGCCAGCAGTCTTGGAGATCATAGCACAAGTCTTCAGCGTATCG 2651818 Query 81553 TAAATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAACAGCTTGACATCTGAGGG 81612 || || ||||| ||||| || |||||||| | || ||| || |||| ||||| Sbjct 2651817 TAGATACCCTCAATGCTGTCGGACTTCATGTCGATCAGGAAGCATGACGACAGTTGAGGT 2651758 Query 81613 CTTTTTGAGCCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAAATAACGGTTTGACATC 81672 || ||||| ||||||| ||||| | || ||| |||| | | ||||| Sbjct 2651757 TGAGGTGTTCCGGCGTTGAACAAGGTTGGCGAGGCATGAGTGAAGCACTTCTGAGACATG 2651698 Query 81673 AGGTCATAGGTTTCCTTGACGCGTGGAATATCGTCACCGTGAATACCGATAGCTACACGC 81732 |||| || || || || | ||| |||||||| || || | || |||||| Sbjct 2651697 AGGTGGTACGTCTCAAGCACCTTATCGACATCATCACCGTGGATGCCCACAGAGACACGC 2651638 Query 81733 ATAAACATGT 81742 || | ||||| Sbjct 2651637 ATGAGCATGT 2651628 Score = 100 bits (110), Expect = 3e-16 Identities = 203/295 (69%), Gaps = 5/295 (2%) Strand=Plus/Minus Query 31249 CACGAGTGCACGCTTATTATTACCGAGGGTGACTCGGCAAAGGCGCTTGCTATTGCTGGC 31308 ||| ||||||| || || | || || ||||| ||||| || | |||||||| || || Sbjct 1091495 CACAAGTGCACACTGATCCTGACTGAAGGTGATTCGGCCAAAGGTCTTGCTATGGCAGG- 1091437 Query 31309 TTGAGT-GTTGTGGGGCGCAATGCGTTCGGGGTGTTTCCGCTCCGAGGCAAGCCGCGTAA 31367 | || || ||||| | | | || ||||||||||| || |||||||| | || Sbjct 1091436 TCGATCAGTCGTGGGTCCCGACTTGTGGGGGGTGTTTCCTCTTCGAGGCAAACTCTTGAA 1091377 Query 31368 CGTTCGTGACGCCTCCGTTAAACAGGTTACGGATAATGAAGAGTTTTCCAACCTGAAAAA 31427 ||| || ||||| || || | || | || | |||| ||| || ||| | || || Sbjct 1091376 CGTGCGAGACGCGTCAATTGACCAAATCTCGAAGAATGCTGAGATTCAGAACATCAAGAA 1091317 Query 31428 GATCCTCGGGCTTCAGCATGGCAAGGTATATAATTCACTGA-GAGAATTGCGGTACGGTC 31486 ||||||| |||||||| || || ||| | | || || || | || || |||| Sbjct 1091316 CTTCCTCGGTCTTCAGCACAAGAAAGTCTAT-ACTGACAGACAAGGCCTTCGATATGGTC 1091258 Query 31487 GCCTCATGATTATGACCGACGCAGATCTCGACGGCAGTCACATCAAGGGTCTTGT 31541 || | ||||| |||||||| |||| ||||| || ||||||||||| ||||| Sbjct 1091257 GCTTAATGATCATGACCGATCAGGATCATGACGGTAGCCACATCAAGGG-CTTGT 1091204 Score = 82.4 bits (90), Expect = 9e-11 Identities = 104/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 80038 GTCCGCAGATAGTACATGCCCGTCTTGAGGCCCTTCTTCCAGCCGTACAGGTGCATAGAA 80097 || || || ||||||||||| ||||| | |||| ||||||||||| | |||||| || Sbjct 2653347 GTACGGAGGTAGTACATGCCAGTCTTCAAGCCCATCTTCCAGCCGGCAAAGTGCATGGAT 2653288 Query 80098 CTGAGCTTCGCAAGTGTGGGGTTCTCCATGAAGATGTTCAGAGACTGAGACTGACAGATG 80157 ||| ||| | | || || | || || | ||||| || || |||||||| ||| Sbjct 2653287 GTGATCTTGCCCATAGTTGGCTCCTTCAAGTGAATGTTGAGGGATTGAGACTGGTCAATG 2653228 Query 80158 AAAGCCCCACGATCTGCCGCCAT 80180 ||||| ||||| || || ||||| Sbjct 2653227 AAAGCACCACGGTCGGCAGCCAT 2653205 >seq2 Length=4816724 Score = 93.3 bits (102), Expect = 5e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 27499 GACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAG 27558 |||||||| ||||||||||| ||||| || ||||| || || || || ||||||||||| Sbjct 234513 GACAAGGAAGGAATTCCTCCTGACCAACAACGTCTGATCTTCGCCGGCAAGCAACTCGAA 234572 Query 27559 GATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618 |||| || || || | ||||| || | || ||||| || || || || || ||| | Sbjct 234573 GATGGCCGCACTCTTTCCGACTACAACATTCAGAAGGAGTCGACCCTCCACCTCGTCCTC 234632 Query 27619 CGTCTTCGCGGTGG 27632 || || || ||||| Sbjct 234633 CGACTCCGTGGTGG 234646 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570310129102560