Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20spinifera_20[genbank_20GCA_5F001599535.1_202016-03-01] 38 sequences; 32,702,796 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq1 136 3e-27 seq3 96.9 3e-15 seq2 84.2 2e-11 >seq1 Length=5022262 Score = 136 bits (150), Expect = 3e-27 Identities = 168/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || || || ||||| |||| || || ||||| ||| | || Sbjct 2612249 ATGCAGATCTTCGTCAAGACCCTTACGGGCAAAACTATCACACTCGAAGTTGAATCCTCA 2612308 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | || || || |||||||||||||||||||| |||||||| ||| Sbjct 2612309 GACACAATCGACAACGTAAAGAGCAAGATTCAAGACAAAGAAGGCATCCCACCCGACCAA 2612368 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || || || || | || || || ||||||||||| | || | || ||||||||| Sbjct 2612369 CAACGATTGATCTTTGCAGGAAAGCAATTGGAAGATGGCAGAACTCTCTCAGATTACAAC 2612428 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || ||||| || || || ||||| | || ||| | |||| |||||||| Sbjct 2612429 ATCCAAAAAGAATCCACGCTACATCTCGTCTTGAGACTGCGAGGTGGCAT 2612478 Score = 125 bits (138), Expect = 6e-24 Identities = 156/214 (73%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 ||||||||| ||||| || |||||||| |||||| | |||||| | ||||| || | || Sbjct 2612476 CATGCAGATCTTTGTCAAGACTCTGACGGGCAAGACGATTACTTTGGAAGTCGAGTCATC 2612535 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 || | ||||| | |||||| || || |||||||| || || || || || ||||| Sbjct 2612536 TGATACCATTGACAACGTCAAATCGAAGATCCAAGACAAGGAGGGTATCCCCCCGGATCA 2612595 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 |||||| || || | || ||||| || ||||| || | ||| | || || ||||| Sbjct 2612596 ACAGCGATTGATCTTTGCAGGCAAGCAGTTGGAGGATGGCCGTACCCTGTCTGACTACAA 2612655 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTG 27200 ||| |||||||| || | |||||||| ||| Sbjct 2612656 CATCCAAAAGGAAAGCACTCTCCATTTGGTGTTG 2612689 Score = 102 bits (112), Expect = 7e-17 Identities = 146/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 27012 ACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAGATGGTCAAACAA 27071 ||||||||| | || || ||||| || ||| | ||| | || || | ||||| Sbjct 2611817 ACCGGCAAGACCATCACCCTTGAGGTCGAATCCAGCGATACCATCGACAACGTCAAGTCC 2611876 Query 27072 AAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAA 27131 || || || ||||| |||||||| || |||||||||||||| | || | ||| || || Sbjct 2611877 AAGATCCAGGACAAGGAAGGCATTCCCCCCGATCAACAGCGCCTCATCTTCGCTGGTAAG 2611936 Query 27132 CAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTACAT 27191 || | ||||| | || | ||| ||||||||||| |||||||||||||| || Sbjct 2611937 CAGCTTGAAGATGGCCGCACTCTGAGCGACTACAACATTCAGAAGGAGTCGACCTTGCAC 2611996 Query 27192 TTGGTTTTGCGTTTGCGGGGTGGCAT 27217 |||||| | ||| | || || || || Sbjct 2611997 TTGGTTCTTCGTCTTCGTGGCGGTAT 2612022 >seq3 Length=3603273 Score = 96.9 bits (106), Expect = 3e-15 Identities = 130/181 (72%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 26997 TTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATT 27056 || || || || || || |||||| | || || ||||| ||||| | |||||| | || Sbjct 2486786 TTCGTCAAGACCCTCACGGGCAAGACCATCACCCTTGAGGTGGAGTCATCCGACACCATC 2486727 Query 27057 GAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTA 27116 || | ||||| || || |||||||| ||||| || || |||||||||||||| || Sbjct 2486726 GACAACGTCAAGTCCAAGATCCAAGACAAGGAAGGAATCCCTCCCGATCAACAGCGATTG 2486667 Query 27117 ATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAG 27176 || | |||||| || ||| | || || | ||| | ||| |||||||| |||||| Sbjct 2486666 ATTTTCGCCGGAAAGCAACTCGAGGATGGCCGAACCCTGAGCGACTACAACATCCAAAAG 2486607 Query 27177 G 27177 | Sbjct 2486606 G 2486606 >seq2 Length=4816724 Score = 84.2 bits (92), Expect = 2e-11 Identities = 97/130 (75%), Gaps = 3/130 (2%) Strand=Plus/Plus Query 27059 GATGGTCAAACAAAAAATTCA---AGACAAAGAAGGCATACCACCCGATCAACAGCGTTT 27115 ||||| |||| || |||| |||||| ||||| || || || || ||||| ||| | Sbjct 234488 GATGGCGAAACTAATCATTCTTGTAGACAAGGAAGGAATTCCTCCTGACCAACAACGTCT 234547 Query 27116 AATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAA 27175 || | ||||||||| ||| | ||||| | || ||||||| ||||||||||| || Sbjct 234548 GATCTTCGCCGGCAAGCAACTCGAAGATGGCCGCACTCTTTCCGACTACAACATTCAGAA 234607 Query 27176 GGAGTCGACC 27185 |||||||||| Sbjct 234608 GGAGTCGACC 234617 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434918193413760