Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20xenobiotica_20[genbank_20GCA_5F000798695.1_202014-12-08] 2,050 sequences; 32,274,853 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq26 116 3e-21 seq54 96.9 3e-15 seq173 89.7 4e-13 >seq26 Length=121939 Score = 116 bits (128), Expect = 3e-21 Identities = 163/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 45109 GCCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTT 45168 |||||| | | ||| || ||||| || || |||||||||||||| |||||||| || Sbjct 31988 GCCACCACGAAGTCTCAACACCAAATGGAGAGTGCTCTCCTTCTGGATGTTGTAATCAGA 32047 Query 45169 CAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGG 45228 ||| || | || |||| || ||||| || || ||||| |||||||| ||||| || Sbjct 32048 CAGGGTACGGCCATCCTCCAACTGCTTTCCTGCAAAGATCAATCGCTGTTGATCGGGGGG 32107 Query 45229 CACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCAC 45288 | |||||||||||| || || || || | | | | || ||| || Sbjct 32108 GATACCCTCCTTGTCTTGGATCTTCGATTTGACGTTGTCAATGGTATCGGATGACTCGAC 32167 Query 45289 CTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCATG 45337 |||| ||||||||||||||| |||| ||||| |||||||| |||||| Sbjct 32168 TTCCAAGGTAATCGTCTTGCCGGTCAAGGTCTTGACAAAGATCTGCATG 32216 Score = 95.1 bits (104), Expect = 1e-14 Identities = 91/117 (78%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||||||||| || |||||||||||||||||||||| |||| ||| |||| || Sbjct 32691 ACCAAGTGCAAGGTCGACTCCTTCTGAATGTTGTAGTCGCTCAGGGTGCGGCCGTCCTCA 32750 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCC 45244 || || || || ||||| || | |||||||| |||||||| | || ||||||||| Sbjct 32751 AGCTGCTTACCAGCGAAGATGAGGCGCTGTTGATCGGGAGGAATGCCTTCCTTGTCC 32807 Score = 89.7 bits (98), Expect = 4e-13 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192 ||| || ||| || || || |||||||||||| || ||| |||| || ||||| Sbjct 32468 GTGGAGAGTGGATTCTTTTTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCTTCGAGTTG 32527 Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252 || |||||||| || | || |||||||| ||||| | || ||||| ||| ||| || Sbjct 32528 CTTGCCGGCGAAGATAAGACGTTGTTGGTCAGGAGGAATGCCTTCCTTATCCTGAATCTT 32587 Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312 ||| || | | | |||| | || ||||| | ||| || |||||||| || Sbjct 32588 GGACTTCACATTGTCGATGGTGTCTGAAGATTCGACCTCAAGGGTGATGGTCTTGCCGGT 32647 Query 45313 CAGAGTCTTCACAAAGATTTGCAT 45336 || ||||| || ||||||||||| Sbjct 32648 GAGGGTCTTGACGAAGATTTGCAT 32671 >seq54 Length=98605 Score = 96.9 bits (106), Expect = 3e-15 Identities = 133/185 (72%), Gaps = 6/185 (3%) Strand=Plus/Minus Query 45147 CCTTCTGAATGTTGTAGTCGTTCAG---TTGGCGATCGTCGTCCAGTTGTTTTCCGGCGA 45203 ||||||| |||||||||||| |||| | ||| ||| ||| ||||| |||||||||| Sbjct 63784 CCTTCTGGATGTTGTAGTCGCTCAGGGTTCGGCCATCCTCG---AGTTGCTTTCCGGCGA 63728 Query 45204 ATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCG 45263 | ||||| |||||||| ||||| || | || |||||||| || || ||| || Sbjct 63727 AAATCAATCGCTGTTGATCGGGGGGAATTCCTTCCTTGTCTTGGATCTTGGACTTGACGT 63668 Query 45264 CCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCA 45323 | | |||| ||||||||| | ||| || ||||||||||| || ||||| | Sbjct 63667 TGTCGATTGTGTCGGACGACTCCACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTGA 63608 Query 45324 CAAAG 45328 | ||| Sbjct 63607 CGAAG 63603 >seq173 Length=52890 Score = 89.7 bits (98), Expect = 4e-13 Identities = 85/109 (78%), Gaps = 0/109 (0%) Strand=Plus/Minus Query 45145 CTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAA 45204 |||||||||||||||||||||| || |||| | || || ||||| || || ||||| Sbjct 4958 CTCCTTCTGAATGTTGTAGTCGGAAAGAGTGCGACCATCTTCGAGTTGCTTGCCAGCGAA 4899 Query 45205 TATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTT 45253 |||| || |||||||| ||||| | || |||||||| |||||| || Sbjct 4898 GATCAGACGTTGTTGGTCAGGAGGAATTCCTTCCTTGTCTGCAATTGTT 4850 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395065329293050