Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20xenobiotica_20[genbank_20GCA_5F000798695.1_202014-12-08] 2,050 sequences; 32,274,853 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq26 134 1e-26 seq173 86.0 5e-12 >seq26 Length=121939 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || || || ||||| || ||| | || | ||||| || | || Sbjct 32215 ATGCAGATCTTTGTCAAGACCTTGACCGGCAAGACGATTACCTTGGAAGTCGAGTCATCC 32156 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||||| | ||| | ||||| || || ||||||||||||||||| || ||||||||| Sbjct 32155 GATACCATTGACAACGTCAAATCGAAGATCCAAGACAAGGAGGGTATCCCCCCCGATCAA 32096 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || | || ||||| || || ||||| |||||| ||| ||| | || ||||||||| Sbjct 32095 CAGCGATTGATCTTTGCAGGAAAGCAGTTGGAGGATGGCCGTACCCTGTCTGATTACAAC 32036 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 || || || || ||| | ||||| || ||| || | || || || Sbjct 32035 ATCCAGAAGGAGAGCACTCTCCATTTGGTGTTGAGACTTCGTGGTGG 31989 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || |||| || || || |||| || ||||||||| || | Sbjct 32443 ATGCAGATCTTCGTCAAGACCCTAACGGGCAAGACTATCACACTCGAAGTGGAATCCTCA 32384 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| | | || || ||||||||||| |||||||| |||||||| ||| Sbjct 32383 GACACAATCGACAACGTGAAGAGCAAGATTCAAGACAAAGAGGGTATCCCACCCGACCAA 32324 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||||| | || ||||| || || || || || ||| | | || |||| |||||||| Sbjct 32323 CAACGATTGATCTTTGCAGGAAAGCAATTGGAAGATGGCAGAACTCTCTCAGATTACAAT 32264 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 || |||||||||||||| ||||| | || ||| |||| || || || Sbjct 32263 ATCCAAAAAGAATCCACGCTACATCTCGTCTTGAGATTACGAGGTGG 32217 Score = 134 bits (148), Expect = 1e-26 Identities = 148/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| || || || || | ||||| || || |||| ||||| || ||| | | Sbjct 32671 ATGCAAATCTTCGTCAAGACCCTCACCGGCAAGACCATCACCCTTGAGGTCGAATCTTCA 32612 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| || | || || ||||| || ||||| || ||||| || || ||| Sbjct 32611 GACACCATCGACAATGTGAAGTCCAAGATTCAGGATAAGGAAGGCATTCCTCCTGACCAA 32552 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||||||||||| || |||||||| || | || || ||||||| ||||||| |||||| Sbjct 32551 CAACGTCTTATCTTCGCCGGCAAGCAACTCGAAGACGGCCGCACCCTCTCCGACTACAAC 32492 Query 22399 ATTCAAAAAGAATCCAC 22415 || |||||||||||||| Sbjct 32491 ATCCAAAAAGAATCCAC 32475 Score = 111 bits (122), Expect = 1e-19 Identities = 147/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302 ||||| || || |||| ||||| || || ||| ||||||| | ||| | |||| Sbjct 32875 ACCGGCAAGACCATCACCCTTGAGGTCGAGTCCAGCGATACCATCGACAACGTCAAGTCC 32816 Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || || || |||||||| || ||||| ||||||||||| || || || || || || || Sbjct 32815 AAGATCCAGGACAAGGAAGGCATTCCTCCCGATCAACAGCGCCTCATCTTCGCTGGTAAG 32756 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACAT 22422 ||| | ||||| ||||||| | ||| ||||||||||| || || || ||| | || Sbjct 32755 CAGCTTGAGGACGGCCGCACCCTGAGCGACTACAACATTCAGAAGGAGTCGACCTTGCAC 32696 Query 22423 TTAGTTTTGCGATTGCGCGGAGGT 22446 || ||| | || |||| || ||| Sbjct 32695 TTGGTTCTCCGTCTGCGTGGCGGT 32672 >seq173 Length=52890 Score = 86.0 bits (94), Expect = 5e-12 Identities = 106/145 (73%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 22302 AAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAA 22361 || |||| ||||||||| || ||||| || || ||||||||||| || || || ||||| Sbjct 4850 AACAATTGCAGACAAGGAAGGAATTCCTCCTGACCAACAACGTCTGATCTTCGCTGGCAA 4909 Query 22362 ACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACA 22421 || | || ||| ||||| | ||||| ||||||||||| || || || ||| | || Sbjct 4910 GCAACTCGAAGATGGTCGCACTCTTTCCGACTACAACATTCAGAAGGAGTCGACCCTCCA 4969 Query 22422 TTTAGTTTTGCGATTGCGCGGAGGT 22446 | | || | ||| | || || ||| Sbjct 4970 TCTCGTCCTCCGACTCCGTGGTGGT 4994 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419717513358250