Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20xenobiotica_20[genbank_20GCA_5F000798695.1_202014-12-08]
2,050 sequences; 32,274,853 total letters
Query= NC_013756.1
Length=368454
Score E
Sequences producing significant alignments: (Bits) Value
seq26 147 5e-30
seq173 104 6e-17
seq54 84.2 5e-11
>seq26
Length=121939
Score = 147 bits (162), Expect = 5e-30
Identities = 158/209 (76%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
||||||||||||||||| || || ||||||| ||||||||| | | || | || |||
Sbjct 32460 AGGACAAGGTGGAGAGTGGATTCTTTTTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCT 32519
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
|| || ||||| ||||||||||| ||||| || ||||| ||| ||| ||||| |||
Sbjct 32520 TCGAGTTGCTTGCCGGCGAAGATAAGACGTTGTTGGTCAGGAGGAATGCCTTCCTTATCC 32579
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|||||||| |||||| |||| |||||||| | ||| || || | ||||| |||
Sbjct 32580 TGAATCTTGGACTTCACATTGTCGATGGTGTCTGAAGATTCGACCTCAAGGGTGATGGTC 32639
Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || ||||| || || || || |||||
Sbjct 32640 TTGCCGGTGAGGGTCTTGACGAAGATTTG 32668
Score = 91.5 bits (100), Expect = 3e-13
Identities = 125/175 (71%), Gaps = 0/175 (0%)
Strand=Plus/Plus
Query 199433 GTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCG 199492
||||||||||| || | ||||||||| || || | || || || |||||||| ||
Sbjct 32703 GTCGACTCCTTCTGAATGTTGTAGTCGCTCAGGGTGCGGCCGTCCTCAAGCTGCTTACCA 32762
Query 199493 GCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTC 199552
||||||||||| ||||| || || ||| ||| ||||| ||||| ||||| |||
Sbjct 32763 GCGAAGATGAGGCGCTGTTGATCGGGAGGAATGCCTTCCTTGTCCTGGATCTTGGACTTG 32822
Query 199553 ACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGA 199607
||| |||| ||| || | | || || || | ||||| ||||| || ||||
Sbjct 32823 ACGTTGTCGATGGTATCGCTGGACTCGACCTCAAGGGTGATGGTCTTGCCGGTGA 32877
>seq173
Length=52890
Score = 104 bits (114), Expect = 6e-17
Identities = 96/122 (79%), Gaps = 0/122 (0%)
Strand=Plus/Minus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
|| |||| ||||| || ||||| ||||||||||| || | ||||||||| | | |||
Sbjct 4987 CGGAGTCGGAGGACGAGATGGAGGGTCGACTCCTTCTGAATGTTGTAGTCGGAAAGAGTG 4928
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
| |||||||| || ||||| || |||||||| ||||| || ||||| ||| |||||||
Sbjct 4927 CGACCATCTTCGAGTTGCTTGCCAGCGAAGATCAGACGTTGTTGGTCAGGAGGAATTCCT 4868
Query 199529 TC 199530
||
Sbjct 4867 TC 4866
>seq54
Length=98605
Score = 84.2 bits (92), Expect = 5e-11
Identities = 127/181 (70%), Gaps = 0/181 (0%)
Strand=Plus/Minus
Query 199440 CCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAGA 199499
|||| |||| ||||||||| || || | ||||| || || |||||||||||||| |
Sbjct 63784 CCTTCTGGATGTTGTAGTCGCTCAGGGTTCGGCCATCCTCGAGTTGCTTTCCGGCGAAAA 63725
Query 199500 TGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTCACGGATT 199559
| | ||||| || || || ||||||||| || || ||||| ||| ||| |
Sbjct 63724 TCAATCGCTGTTGATCGGGGGGAATTCCTTCCTTGTCTTGGATCTTGGACTTGACGTTGT 63665
Query 199560 CGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTCACAA 199619
||| ||||| | | || || || | ||||| ||||| |||||||| || || || |
Sbjct 63664 CGATTGTGTCGGACGACTCCACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGA 63605
Query 199620 A 199620
|
Sbjct 63604 A 63604
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1178890634887350
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |