Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20xenobiotica_20[genbank_20GCA_5F000798695.1_202014-12-08] 2,050 sequences; 32,274,853 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq81 127 2e-24 >seq81 Length=81880 Score = 127 bits (140), Expect = 2e-24 Identities = 390/596 (65%), Gaps = 8/596 (1%) Strand=Plus/Minus Query 48211 TCATAAATATATCTGGTATCCAAAGAGCTATA-AATAAATCCCTAGTTCTTAGTTCTTCA 48269 |||| || | || ||| |||| ||||| ||| || ||||| | || | | |||||| Sbjct 14113 TCATGAACAGGTCAGGTGTCCAGAGAGC-ATAGAACAAATCACGAGCACGGACTTCTTCT 14055 Query 48270 TTGCCACTATTCCTTTTAAG-TTCAAGAAAGTCCATTATATCAGCATGCCATGGTTCTAA 48328 || || ||| || | || |||||||| ||| | | |||||| |||||||| || | Sbjct 14054 TTTCCGTGGTTCTTTCTCAGGTTCAAGAA-GTCGAAAACATCAGCGTGCCATGGCTCAAT 13996 Query 48329 ATATATTGCCATTACACCTGGTCGTTTATTACCTCCTTGATCTATATATCTGGCAGTATT 48388 || || || | |||| || || || || || || || || | ||| | ||| || || Sbjct 13995 GTAGATGGCAAAAGCACCGGGGCGCTTGTTGCCACCCTGGTCAACATAGCGGGCTGTGTT 13936 Query 48389 GTTATAAACTCTTAACATTGGGACAATACCATTTGATATACCATTGGTTCCCGAAATATA 48448 ||| | || | | ||| || | | ||||| || | || || || || | ||| || Sbjct 13935 GTTGAAGACGCGAAGCATGGGAATGAGGCCATTCGACGTGCCGTTAGTGCCGGCAATGTA 13876 Query 48449 ACTTCCACTAGCTCTTAT--ATTACTAATTGAAATACCTATACCACCTGCCATTTTAGAT 48506 || |||||| || | | ||| ||| || ||||| || || | || || Sbjct 13875 TGAGCCGGTAGCTCGAATGCAGTGAGCATTCAAA--CCGATACCGCCAGCAGTCTTGGAG 13818 Query 48507 ATTAGAGCACACCGTTTAAGGGTATCATAAATTCCTTCTATACTATCATCTATCATATTT 48566 || | ||||| ||| || ||||||||||| || || || || || |||| | Sbjct 13817 ATCATGGCACAAGTTTTCAGCGTATCATAAATACCCTCAATGCTGTCGGACTTCATGTCA 13758 Query 48567 AATAGAAAACAACTAGACATTTGCGGATGACAAGTTCCTGAATTAAATAATGTTGGAGAT 48626 | | || || |||| ||| || ||| ||||| | || || || ||||| || Sbjct 13757 ATCAAGAAGCATGACGACAGTTGAGGTTGAGGTGTTCCAGCGTTGAACAAAGTTGGCGAA 13698 Query 48627 GCATGAATAAACCATTTCTCTGATAACAATTTATATGTTTCAATAACAGAATCTATATCC 48686 |||||| | || | |||| || | | || ||||| |||| || ||| ||||| Sbjct 13697 GCATGAGTGAAGAACTTCTGAGACATGAGGTTGTATGTCTCAAGGACTTTATCGATATCA 13638 Query 48687 CATTGATGTATACCTATAGATACACGCATTAACATATATTGAGGTCTTTCAACAATTTTG 48746 | || || || | ||| |||||||| | ||| | ||| |||| ||| ||| || Sbjct 13637 TCTCCGTGAATGCCCACAGAGACACGCATAATCATGTGTTGTGGTCGCTCAGCAACTTGC 13578 Query 48747 TTATTTATTTTCAAAAGATATGATTTTTCCAATGTTTTAAAACCAAAATAGTTGTA 48802 || || |||| || |||||| ||||||| || || || || ||||||||||| Sbjct 13577 TTGCCAATCTTCAGCAGGTATGATCTTTCCAACGTCTTGAAGCCGAAATAGTTGTA 13522 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562094395962000