Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20xenobiotica_20[genbank_20GCA_5F000798695.1_202014-12-08] 2,050 sequences; 32,274,853 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq26 167 2e-36 seq54 93.3 3e-14 >seq26 Length=121939 Score = 167 bits (184), Expect = 2e-36 Identities = 173/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || |||| ||| | || || | ||| || || ||||||||||| ||||||||||| | | Sbjct 32217 CCACCTCGTAATCTCAAGACGAGATGTAGCGTGGATTCTTTTTGGATATTGTAATCTGAG 32276 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | ||||||| |||| ||||||||||| |||||||| ||||| || ||||| ||||| || Sbjct 32277 AGAGTTCTGCCATCTTCCAATTGCTTTCCTGCAAAGATCAATCGTTGTTGGTCGGGTGGG 32336 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 || || ||||| |||||||| || || || | || | ||||| || | ||||||| Sbjct 32337 ATACCCTCTTTGTCTTGAATCTTGCTCTTCACGTTGTCGATTGTGTCTGAGGATTCCACT 32396 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || |||| || ||||| |||| || || || || |||||||| Sbjct 32397 TCGAGTGTGATAGTCTTGCCCGTTAGGGTCTTGACGAAGATCTGCAT 32443 Score = 114 bits (126), Expect = 1e-20 Identities = 153/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 101258 AAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCG 101317 || || ||||| || || || || || || |||||||| | | || | | |||| Sbjct 32004 AACACCAAATGGAGAGTGCTCTCCTTCTGGATGTTGTAATCAGACAGGGTACGGCCATCC 32063 Query 101318 TCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCT 101377 ||||| ||||| |||||||| ||||| |||||||||||||| || || || || || ||| Sbjct 32064 TCCAACTGCTTTCCTGCAAAGATCAATCGCTGTTGATCGGGGGGGATACCCTCCTTGTCT 32123 Query 101378 TGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTT 101437 || || || ||| || | || | || || || | || ||||| | || | ||| Sbjct 32124 TGGATCTTCGATTTGACGTTGTCAATGGTATCGGATGACTCGACTTCCAAGGTAATCGTC 32183 Query 101438 TTGCCGGTTAAAGTTTTTACAAATATCTGCATG 101470 |||||||| || || || ||||| ||||||||| Sbjct 32184 TTGCCGGTCAAGGTCTTGACAAAGATCTGCATG 32216 Score = 114 bits (126), Expect = 1e-20 Identities = 147/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326 || || || ||||||||||| || ||||| |||| || || | | | || || | |||| Sbjct 32469 TGGAGAGTGGATTCTTTTTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCTTCGAGTTGC 32528 Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 || || || || || | ||| ||||| || || ||||||||||| ||||| ||||| || Sbjct 32529 TTGCCGGCGAAGATAAGACGTTGTTGGTCAGGAGGAATGCCTTCCTTATCCTGAATCTTG 32588 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446 || ||| | || | ||||| || | ||| || ||||| |||| || |||||||| Sbjct 32589 GACTTCACATTGTCGATGGTGTCTGAAGATTCGACCTCAAGGGTGATGGTCTTGCCGGTG 32648 Query 101447 AAAGTTTTTACAAATATCTGCAT 101469 | || || || || || ||||| Sbjct 32649 AGGGTCTTGACGAAGATTTGCAT 32671 >seq54 Length=98605 Score = 93.3 bits (102), Expect = 3e-14 Identities = 119/164 (73%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 101282 TTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATC 101341 || || || ||||| ||| | |||| | |||| || | |||||| || || || ||| Sbjct 63782 TTCTGGATGTTGTAGTCGCTCAGGGTTCGGCCATCCTCGAGTTGCTTTCCGGCGAAAATC 63723 Query 101342 AAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCT 101401 || |||||||||||||| ||||| ||||| || ||||| || || || || | || Sbjct 63722 AATCGCTGTTGATCGGGGGGAATTCCTTCCTTGTCTTGGATCTTGGACTTGACGTTGTCG 63663 Query 101402 ACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGT 101445 | ||||| |||| ||||| ||||| |||| || ||||| || Sbjct 63662 ATTGTGTCGGACGACTCCACCTCAAGGGTGATGGTCTTGCCCGT 63619 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396268499231850