Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20xenobiotica_20[genbank_20GCA_5F000798695.1_202014-12-08] 2,050 sequences; 32,274,853 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq125 147 1e-29 seq26 114 8e-20 seq173 91.5 1e-12 >seq125 Length=65555 Score = 147 bits (162), Expect = 1e-29 Identities = 326/487 (67%), Gaps = 4/487 (1%) Strand=Plus/Minus Query 474392 GAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACTGAA 474451 ||||| |||||||| ||||| || || |||||||||| || | ||| | || || || Sbjct 27095 GAAATCATTGCCAACGACCAGGGCAACCGAACAACACCTTCCTTTGTCGCCTTCACAGAC 27036 Query 474452 ACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAATACT 474511 || || | ||| ||||| |||||||| || | |||| || || ||| || || Sbjct 27035 ACCGAGCGTCTCATTGGTGATGCTGCAAAGAACCAAGTCGCCATGAACCCTACCAACACC 26976 Query 474512 ATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCTGAT 474571 | || || || || |||||||||| || || |||| || | || || |||| Sbjct 26975 GTCTTCGACGCCAAGCGATTGATTGGCCGGAAGTTTGCCGACGCTGAGGTTCAGGCTGAC 26916 Query 474572 ATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGAAGC--AA 474629 ||| |||| || || ||||| | | || | || ||| || |||| || Sbjct 26915 ATGAAGCATTTCCCATTCAAGGTTGTCGACAAGGGCAGCAAGCCAGTCATTGAAGTCGAA 26856 Query 474630 TACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTAGCCA 474689 | || | || || || |||||||| |||| ||| |||| || || ||||| || ||| Sbjct 26855 TTCAAG--GGCGAGACCAAACAATTCACACCAGAAGAAATCTCCTCTATGGTCTTGACCA 26798 Query 474690 AAATGAAACAAACCGCGAGCTCATATCTTGGACAAGAAGTAACTGATGCAGTAATTACTG 474749 | |||| | | ||||| ||||| || || || | | || || | || | Sbjct 26797 AGATGAGAGAGACCGCTGAATCATACCTCGGCGGCACTGTCAACAACGCTGTCGTCACAG 26738 Query 474750 TTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTGCAG 474809 | || || || ||||||||| ||| | ||||| || || || || || ||||| | Sbjct 26737 TCCCTGCGTACTTTAATGATAGTCAGAGGCAAGCCACAAAGGACGCCGGTCTCATTGCCG 26678 Query 474810 GTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGTCTTG 474869 |||| ||||| | |||||||| || ||||| || || || || |||| |||||||||| Sbjct 26677 GTCTCAATGTCCTCCGTATTATCAACGAACCTACCGCCGCTGCCATTGCCTATGGTCTTG 26618 Query 474870 ATAAGAA 474876 | ||||| Sbjct 26617 ACAAGAA 26611 >seq26 Length=121939 Score = 114 bits (126), Expect = 8e-20 Identities = 160/225 (71%), Gaps = 12/225 (5%) Strand=Plus/Plus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||| |||||||| ||||| || || || |||||| | || || || | || || Sbjct 32450 ACGGAGACGGAGGACAAGGTGGAGAGTGGATTCTTTTTGGATGTTGTAGTCGGAGAGGGT 32509 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | | ||||| |||||||| || || || |||||||||||||| ||||||||||| || Sbjct 32510 GCGGCCGTCTTCGAGTTGCTTGCCGGCGAAGATAAGACGTTGTTGGTCAGGAGGAATGCC 32569 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTT----- 480725 |||||| || |||||||| || ||| || || |||| ||||| | Sbjct 32570 TTCCTTATCCTGAATCTTGGACTTCACATTGTCGAT------GGTGTCTGAAGATTCGAC 32623 Query 480726 -TCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 |||||||| || || || |||||||| ||||| ||||| ||||| Sbjct 32624 CTCAAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATTTG 32668 Score = 87.8 bits (96), Expect = 1e-11 Identities = 143/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 480564 ACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTTCTGTTATCTTCA 480623 || ||||| || || |||||| | ||| ||||| | ||||||||| |||||| Sbjct 32235 ACGAGATGTAGCGTGGATTCTTTTTGGATATTGTAATCTGAGAGAGTTCTGCCATCTTCC 32294 Query 480624 AGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGA 480683 | ||||||||| ||||| || | |||||||| || || || || || || ||||||||| Sbjct 32295 AATTGCTTTCCTGCAAAGATCAATCGTTGTTGGTCGGGTGGGATACCCTCTTTGTCTTGA 32354 Query 480684 ATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAATAGTTTTA 480743 ||||| || || || || || || | | | ||| || || ||||| || Sbjct 32355 ATCTTGCTCTTCACGTTGTCGATTGTGTCTGAGGATTCCACTTCGAGTGTGATAGTCTTG 32414 Query 480744 CCGGTGAGAGTCTTAACGAAAATTTG 480769 || || || ||||| ||||| || || Sbjct 32415 CCCGTTAGGGTCTTGACGAAGATCTG 32440 >seq173 Length=52890 Score = 91.5 bits (100), Expect = 1e-12 Identities = 98/130 (75%), Gaps = 0/130 (0%) Strand=Plus/Minus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||| || ||||| || ||||| || || || || || || || || | ||||| Sbjct 4988 ACGGAGTCGGAGGACGAGATGGAGGGTCGACTCCTTCTGAATGTTGTAGTCGGAAAGAGT 4929 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | |||||| |||||||| ||||| || || ||||||||||| |||||||||||||| Sbjct 4928 GCGACCATCTTCGAGTTGCTTGCCAGCGAAGATCAGACGTTGTTGGTCAGGAGGAATTCC 4869 Query 480671 TTCCTTGTCT 480680 |||||||||| Sbjct 4868 TTCCTTGTCT 4859 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268091265553400