Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20xenobiotica_20[genbank_20GCA_5F000798695.1_202014-12-08] 2,050 sequences; 32,274,853 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq125 118 8e-21 seq43 87.8 1e-11 >seq125 Length=65555 Score = 118 bits (130), Expect = 8e-21 Identities = 414/637 (65%), Gaps = 7/637 (1%) Strand=Plus/Plus Query 282183 CAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTT 282242 |||| || || || || || ||||| ||||| | ||| | ||| | || | | |||| Sbjct 26463 CAAG-CGGTTGTCGAAGTCCTCACCACCCAAGTGAGTGTCTCCGGCGGTCGACTTGACTT 26521 Query 282243 GGAAAAGTCCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAA 282302 || | || ||||| | | ||| || | ||||| ||| |||||||| | ||| | Sbjct 26522 CAAAGATACCCTCTTCGATGGTCAAGAGGGAGACATCGAAGGTACCACCACCGAGATCGA 26581 Query 282303 AAATAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAG 282362 | || || ||||| || | || || ||||||||||| |||| ||||| | Sbjct 26582 AGATGAGAACATTGCGCTCGCCAACAGTCTTCTTGTCAAGACCATAGGCAATGGCAGCGG 26641 Query 282363 CAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAG 282422 | || ||||| || ||||| | | ||||| ||||| ||||| || || || || | Sbjct 26642 CGGTAGGTTCGTTGATAATACGGAGGACATTGAGACCGGCAATGAGACCGGCGTCCTTTG 26701 Query 282423 TGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTT-ACT 282481 ||||||| || || ||| ||||| || ||||| || || | || || | |||| || Sbjct 26702 TGGCTTGCCTCTGACTATCATTAAAGTACGCAGGGACTGTGACGACAGCGT-TGTTGACA 26760 Query 282482 TCTTTTCCAATATAAGCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATT 282541 || | || | || || | | |||| || | || | ||| || || ||| Sbjct 26761 GTGCCGCCGAGGTATGATTCAGCGGTCTCTCTCATCTTGGTCAAGACCATAGAGGAGATT 26820 Query 282542 TGTTCTGGAGAATATTGCTTGGATTC-ATTTTGATATGATACTTCAAAATATGGTTTATT 282600 | |||||| | |||| |||| || |||| || ||||||| ||| || | Sbjct 26821 TCTTCTGGTGTGAATTGTTTGGTCTCGCCCTTGA-ATTCGACTTCAATGACTGGCTTGCT 26879 Query 282601 ACCAACATTAATAACTTTAAATGGCCAATATTTCATATCTGATTGAACACTTTG-GTCAT 282659 || | | ||| || ||||| ||| ||||| || | ||||| || | ||| Sbjct 26880 GCCCTTGTCGACAACCTTGAATGGGAAATGCTTCATGTCAGCCTGAAC-CTCAGCGTCGG 26938 Query 282660 TAAAATCTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAG 282719 ||| | | ||||| ||||| || || || || | || ||||| || || | || Sbjct 26939 CAAACTTCCGGCCAATCAATCGCTTGGCGTCGAAGACGGTGTTGGTAGGGTTCATGGCGA 26998 Query 282720 CTTGATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATG 282779 |||| | || || ||||| ||||| ||| | || || ||||| || | ||| | || | Sbjct 26999 CTTGGTTCTTTGCAGCATCACCAATGAGACGCTCGGTGTCTGTGAAGGCGACAAAGGAAG 27058 Query 282780 GAGTTGTGCGATTACCTTGATCATTCGCAATAATTTC 282816 | ||||| || || || || || || ||||| ||||| Sbjct 27059 GTGTTGTTCGGTTGCCCTGGTCGTTGGCAATGATTTC 27095 >seq43 Length=104380 Score = 87.8 bits (96), Expect = 1e-11 Identities = 234/357 (66%), Gaps = 3/357 (1%) Strand=Plus/Minus Query 282193 ATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCC 282252 ||| ||||||||||| || | | ||||| || | || || || | ||| | || Sbjct 76497 ATCGAAATCTTCACCACCGAGATGAGTATCACCGGCAGTGGCCAAGACCTCGAACACGCC 76438 Query 282253 ATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTAC 282312 ||||| | || | || | ||||| || |||||||| | ||| | | || | Sbjct 76437 GTCTTCGATCGAAAGGAGGGAGACATCGAAAGTACCACCACCAAGATCGTAGACAATGAT 76378 Query 282313 ATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTC 282372 | | |||||| | || ||||| ||||| ||||||| || ||||| ||||| || Sbjct 76377 TTGGCTCTCTTTGCC---CTTCTTATCGAGACCGTACGCAATGGCGGCAGCTGTTGGCTC 76321 Query 282373 ATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCT 282432 || | | | | ||| | |||||||| || | || || || || |||||||| || Sbjct 76320 GTTGACCACACGGAGAACCGTCAGACCAGCGATCGTGCCGGCGTCCTTTGTGGCTTGCCT 76261 Query 282433 TTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAAT 282492 || | ||| ||||| || || ||||| || | |||||| | ||| |||| || || | Sbjct 76260 CTGGGCATCATTAAAGTAGGCCGGAACCGTGACAACGGCGTGTGTAACTTTCTTGCCCAG 76201 Query 282493 ATAAGCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGG 282549 ||| || || | ||||| || | | |||||| | ||||||| ||| || Sbjct 76200 ATATGCTTCCGCGACCTCCTTCATCTTGCCAAGAATCATGGCGGAAATTTCTTCGGG 76144 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740529753663300