Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20xenobiotica_20[genbank_20GCA_5F000798695.1_202014-12-08] 2,050 sequences; 32,274,853 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq26 134 3e-26 seq173 84.2 4e-11 >seq26 Length=121939 Score = 134 bits (148), Expect = 3e-26 Identities = 155/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 82602 ACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCT 82661 || || || ||||| || ||||| || || |||||||| || | | || || || Sbjct 32007 ACCAAATGGAGAGTGCTCTCCTTCTGGATGTTGTAATCAGACAGGGTACGGCCATCCTCC 32066 Query 82662 AGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGA 82721 | || ||||| |||||||| | || |||||||| || || || || ||||| ||||| Sbjct 32067 AACTGCTTTCCTGCAAAGATCAATCGCTGTTGATCGGGGGGGATACCCTCCTTGTCTTGG 32126 Query 82722 ATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTG 82781 ||||| | ||| || || ||||| ||||| | || |||||||| || ||||||||| Sbjct 32127 ATCTTCGATTTGACGTTGTCAATGGTATCGGATGACTCGACTTCCAAGGTAATCGTCTTG 32186 Query 82782 CCTGTCAACGTCTTTACAAATATCTGCAT 82810 || ||||| ||||| ||||| |||||||| Sbjct 32187 CCGGTCAAGGTCTTGACAAAGATCTGCAT 32215 Score = 131 bits (144), Expect = 3e-25 Identities = 155/205 (76%), Gaps = 4/205 (2%) Strand=Plus/Plus Query 82608 TGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGT 82667 || || || |||||||| || ||||| ||||| || ||| |||| || ||||| | ||| Sbjct 32241 TGTAGCGTGGATTCTTTTTGGATATTGTAATCTGAGAGAGTTCTGCCATCTTCCAATTGC 32300 Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTT 82727 ||||| |||||||| | || |||||| || || || || || || || ||||||||| || Sbjct 32301 TTTCCTGCAAAGATCAATCGTTGTTGGTCGGGTGGGATACCCTCTTTGTCTTGAATC-TT 32359 Query 82728 GCT-TTTACATTTTCAATCGTATCATTAGG-TTCTACTTCCAAAGTTATCGTCTTGCCTG 82785 ||| || || || || || || || | ||| ||| ||||| | || || |||||||| | Sbjct 32360 GCTCTTCACGTTGTCGATTGTGTC-TGAGGATTCCACTTCGAGTGTGATAGTCTTGCCCG 32418 Query 82786 TCAACGTCTTTACAAATATCTGCAT 82810 | | ||||| || || |||||||| Sbjct 32419 TTAGGGTCTTGACGAAGATCTGCAT 32443 Score = 129 bits (142), Expect = 1e-24 Identities = 166/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| || | | ||| || || | ||| ||||| |||||||| || || || || || | Sbjct 32443 TACCACCACGGAGACGGAGGACAAGGTGGAGAGTGGATTCTTTTTGGATGTTGTAGTCGG 32502 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | || | | |||||||| ||||| || || || ||||| || | |||||| || |||| Sbjct 32503 AGAGGGTGCGGCCGTCTTCGAGTTGCTTGCCGGCGAAGATAAGACGTTGTTGGTCAGGAG 32562 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || ||||||||||| |||||||| | || ||||| || || || || || ||| | Sbjct 32563 GAATGCCTTCCTTATCCTGAATCTTGGACTTCACATTGTCGATGGTGTCTGAAGATTCGA 32622 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 | || | || || |||||||| || | ||||| || || || ||||| Sbjct 32623 CCTCAAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATTTGCAT 32671 >seq173 Length=52890 Score = 84.2 bits (92), Expect = 4e-11 Identities = 85/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 82608 TGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGT 82667 || || || || || ||||| || || || || || ||| | | ||| ||||| ||||| Sbjct 4969 TGGAGGGTCGACTCCTTCTGAATGTTGTAGTCGGAAAGAGTGCGACCATCTTCGAGTTGC 4910 Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCT 82718 || ||||| ||||| || | |||||| || ||||| ||||||||||| ||| Sbjct 4909 TTGCCAGCGAAGATCAGACGTTGTTGGTCAGGAGGAATTCCTTCCTTGTCT 4859 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981801411694950