Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20xenobiotica_20[genbank_20GCA_5F000798695.1_202014-12-08] 2,050 sequences; 32,274,853 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq125 212 2e-49 seq26 156 1e-32 seq43 152 2e-31 seq180 120 9e-22 seq173 113 1e-19 >seq125 Length=65555 Score = 212 bits (234), Expect = 2e-49 Identities = 489/733 (67%), Gaps = 4/733 (1%) Strand=Plus/Minus Query 349202 ATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGTGTA 349261 ||||| |||||| | ||||| || || || || || | | | | |||| ||| | Sbjct 27155 ATAGGTATCGATCTGGGTACGACCTACTCGTGCGTAGGCATCTTCAGAGATGACCGTATC 27096 Query 349262 GAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACCGAA 349321 ||||| ||||| || || || || ||| ||||||| || || | || || || || || Sbjct 27095 GAAATCATTGCCAACGACCAGGGCAACCGAACAACACCTTCCTTTGTCGCCTTCACAGAC 27036 Query 349322 ACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAATACG 349381 || |||||| | ||||||||| ||||||| || |||| || || || | || || Sbjct 27035 ACCGAGCGTCTCATTGGTGATGCTGCAAAGAACCAAGTCGCCATGAACCCTACCAACACC 26976 Query 349382 GTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGACAAATCTACACAATCTGAT 349441 || || || || |||||| | ||||| | | ||| | ||| || |||| Sbjct 26975 GTCTTCGACGCCAAGCGATTGATTGGCCGGAAGTTTGCCGACGCTGAGGTTCAGGCTGAC 26916 Query 349442 CTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATTGAGGTT 349501 | || ||||| || || | ||||| | | ||| || || ||| | ||||| || Sbjct 26915 ATGAAGCATTTCCCATTCAAGGTTGT-CGACAAG--GGCAGCAAGCCAGTCATTGAAGTC 26859 Query 349502 GAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGTTTTAGTT 349561 |||| || || || |||||||| ||| |||||||| || || ||||| || Sbjct 26858 GAATTCAAGGGCGAGACCAAACAATTCACACCAGAAGAAATCTCCTCTATGGTCTTGACC 26799 Query 349562 AAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTATTACT 349621 || |||| || | |||||| |||| | || | || || | | ||||| | || Sbjct 26798 AAGATGAGAGAGACCGCTGAATCATACCTCGGCGGCACTGTCAACAACGCTGTCGTCACA 26739 Query 349622 GTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCATTGCG 349681 || || || || ||||||||| ||| | || ||||| || || || |||||| Sbjct 26738 GTCCCTGCGTACTTTAATGATAGTCAGAGGCAAGCCACAAAGGACGCCGGTCTCATTGCC 26679 Query 349682 GGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGGGCTT 349741 || | ||||| || | || || || ||||| || || || || ||||| ||||| ||| Sbjct 26678 GGTCTCAATGTCCTCCGTATTATCAACGAACCTACCGCCGCTGCCATTGCCTATGGTCTT 26619 Query 349742 GATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTACTTTT 349801 || || | || || || ||| |||| || || ||| | ||||||||||| || Sbjct 26618 GACAAGAAGACTGTTGGCGAGCGCAATGTTCTCATCTTCGATCTCGGTGGTGGTACCTTC 26559 Query 349802 GATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTGGTGAT 349861 ||||| || || | || | |||||||| || |||||||| || | || || || || Sbjct 26558 GATGTCTCCCTCTTGACCATCGAAGAGGGTATCTTTGAAGTCAAGTCGACCGCCGGAGAC 26499 Query 349862 ACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTTAAAGAATTT 349921 || || | ||||| || || || || || || | ||| || ||||| || ||||| Sbjct 26498 ACTCACTTGGGTGGTGAGGACTTCGACAACCGCTTGGTTAACCACTTTGTGAACGAATTC 26439 Query 349922 AAGCGTCAAGCTA 349934 || ||| |||||| Sbjct 26438 AAACGT-AAGCTA 26427 >seq26 Length=121939 Score = 156 bits (172), Expect = 1e-32 Identities = 173/231 (75%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | || ||||| || ||||| || |||||||| || || || || Sbjct 32441 CATACCACCACGGAGACGGAGGACAAGGTGGAGAGTGGATTCTTTTTGGATGTTGTAGTC 32500 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | || || || ||||| ||||| || || || ||||| |||||||| || ||||| Sbjct 32501 GGAGAGGGTGCGGCCGTCTTCGAGTTGCTTGCCGGCGAAGATAAGACGTTGTTGGTCAGG 32560 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 |||||| ||||| ||||||||||| || | || ||||| || || | || || | ||| Sbjct 32561 AGGAATGCCTTCCTTATCCTGAATCTTGGACTTCACATTGTCGATGGTGTCTGAAGATTC 32620 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || ||||| || | ||||| ||||| || || || || || || ||||| Sbjct 32621 GACCTCAAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATTTGCAT 32671 >seq43 Length=104380 Score = 152 bits (168), Expect = 2e-31 Identities = 264/383 (69%), Gaps = 3/383 (1%) Strand=Plus/Plus Query 349532 CCCGAAGAAATTTCATCAATGGTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTA 349591 |||||||||||||| | ||| || | | || |||||||| | || ||||||||| | Sbjct 76144 CCCGAAGAAATTTCCGCCATGATTCTTGGCAAGATGAAGGAGGTCGCGGAAGCATATCTG 76203 Query 349592 GGTGAAACAGTAACTGATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGT 349651 || | | ||| || | || ||| | || || || ||||| ||||||||||||||| | Sbjct 76204 GGCAAGAAAGTTACACACGCCGTTGTCACGGTTCCGGCCTACTTTAATGATGCCCAGAGG 76263 Query 349652 TCTGCAACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAA 349711 || ||||| || || |||| || || || | | ||||| | || | || || Sbjct 76264 CAAGCCACAAAGGACGCCGGCACGATCGCTGGTCTGACGGTTCTCCGTGTGGTCAACGAG 76323 Query 349712 CCCACTGCTGCAGCAATTGCATATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATT 349771 || || ||||| || ||||| || || || ||||| || | | |||| | | || Sbjct 76324 CCAACAGCTGCCGCCATTGCGTACGGTCTCGATAA---GAAGGGCAAAGAGAGCCAAATC 76380 Query 349772 CTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGA 349831 || | | ||| | |||||||||||||| ||||| || || || | | ||||| || Sbjct 76381 ATTGTCTACGATCTTGGTGGTGGTACTTTCGATGTCTCCCTCCTTTCGATCGAAGACGGC 76440 Query 349832 ATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAAT 349891 | || || || || ||||| |||||||| ||||| ||||| |||||||| ||| | Sbjct 76441 GTGTTCGAGGTCTTGGCCACTGCCGGTGATACTCATCTCGGTGGTGAAGATTTCGATCAG 76500 Query 349892 CGTCTCGTTTCGCATTTTGTTAA 349914 || || || || ||||| || Sbjct 76501 CGAGTCATTGATCACTTTGTCAA 76523 >seq180 Length=51275 Score = 120 bits (132), Expect = 9e-22 Identities = 224/329 (68%), Gaps = 0/329 (0%) Strand=Plus/Minus Query 378120 ATCAAATCCATCATCTCCATATGAGAATTGAACAATTTTATCTTTATTGTTTCTTACAGT 378179 ||||| || || ||||| || |||||||||||| || | || || || || Sbjct 37161 ATCAAGACCGTCTTCTCCGTAAAGGAATTGAACAATGTTGCCACGGGAGTCTCGAACGGT 37102 Query 378180 CATATCATATCTAACCATTAAATCTTCTAATGCTTTAATAAGTCGTCGAGAAATATAACC 378239 |||||||| | || | | ||||| | ||||||| ||||| || ||| || || Sbjct 37101 AGTATCATATTTGACAGTCACTTCTTCAAGCGCTTTAACCAGTCGGCGCTGAATGTAGCC 37042 Query 378240 AGTTTGACTAGTTTTAACTGCAGTATCAATTAAACCAACACGACCACCCATTGCATGGAA 378299 |||| |||||| || || ||||| || ||||| |||||||| |||| || || || Sbjct 37041 GGTTTCCGCAGTTTTGACAGCGGTATCGATCAAACCTTCACGACCAGCCATGGCGTGAAA 36982 Query 378300 GAATAATTCAGTAGGAGTAAGTCCACCAATAAATGAACTCTCAATAAATCCTCTTGCGCC 378359 ||| |||||||| ||||| || || | || | | || | || | ||| |||| | Sbjct 36981 GAAGAATTCAGTGGGAGTCAGGCCTCGAAGATAGGAGTTTTCGACAAAGCCTCGAGACGG 36922 Query 378360 TGGCGAATCATCATATTTTGTATAATGAGGTAATGTACGATTCTCAAACCCATATGGAAT 378419 || ||| | ||| | ||| | | |||| || || ||||||| || || || | ||||| Sbjct 36921 TGCCGAGTAATCGTCTTTGGCAAAATGCGGCAAAGTACGATACTTGAAGCCGAAGGGAAT 36862 Query 378420 TCGTTTTCCATCAACATTCTGTTGACCAA 378448 || || || || || ||| ||||||| Sbjct 36861 ACGCTTGCCCTCCACGGCCTGCTGACCAA 36833 >seq173 Length=52890 Score = 113 bits (124), Expect = 1e-19 Identities = 106/135 (79%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 140510 ACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGA 140569 ||||||||| | || || || ||||| || || ||||| || ||||| || || || || Sbjct 4994 ACCACCACGGAGTCGGAGGACGAGATGGAGGGTCGACTCCTTCTGAATGTTGTAGTCGGA 4935 Query 140570 TAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGG 140629 | || || |||||||| ||||| || ||||| ||||| |||||||| || |||||||| Sbjct 4934 AAGAGTGCGACCATCTTCGAGTTGCTTGCCAGCGAAGATCAGACGTTGTTGGTCAGGAGG 4875 Query 140630 AATTCCTTCTTTATC 140644 ||||||||| || || Sbjct 4874 AATTCCTTCCTTGTC 4860 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515214600896150