Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20xenobiotica_20[genbank_20GCA_5F000835505.1_202015-02-23] 15 sequences; 31,405,760 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq3 104 3e-17 >seq3 Length=5039080 Score = 104 bits (114), Expect = 3e-17 Identities = 136/186 (73%), Gaps = 2/186 (1%) Strand=Plus/Plus Query 42975 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 43034 ||||| ||||| || |||||| ||||| ||||| || |||||| || | || || Sbjct 2338988 ACCAAGTGCAAGGTCGACTCCTTCTGAATGTTGTAGTCGCTCAGAGTGCGGCCATCTTCA 2339047 Query 43035 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 43094 ||||||||||||||||| ||||| ||||| || |||| || | || ||||||||| | Sbjct 2339048 AGCTGCTTACCAGCGAAGATGAGGCGCTGTTGATCGGGGGGAATGCCTTCCTTGTCCTGG 2339107 Query 43095 ATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTT 43153 || || || | ||| | | | || ||||| ||||| || || | |||||||| || Sbjct 2339108 ATCTTGGACTTCA-CGTTGTCGATGGTATCGCTGGATTCGACCTCAAGGGTGATGGTCTT 2339166 Query 43154 GCCCGT 43159 ||| || Sbjct 2339167 GCCGGT 2339172 Score = 100 bits (110), Expect = 3e-16 Identities = 152/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 42971 CAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTC 43030 |||||||||||| | ||||| |||||||| || ||||| |||| ||| || || | || Sbjct 2338300 CAACACCAAATGGAGAGTGCTTTCCTTTTGGATGTTGTAGTCAGACAGGGTACGGCCATC 2338359 Query 43031 ATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTC 43090 || | |||||| || || || || | |||||| || || | || | | ||||||||| Sbjct 2338360 CTCCAACTGCTTGCCTGCAAAGATCAATCGCTGTTGATCCGGGGGGATACCCTCCTTGTC 2338419 Query 43091 CATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGG 43149 ||| || ||||| ||| | | | || || || || || || | || || | Sbjct 2338420 TTGGATCTTCGATTTGA-CGTTGTCAATGGTATCAGATGACTCGACTTCCAAAGTAATCG 2338478 Query 43150 TTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 | |||||||| || ||||| |||||||| ||||| Sbjct 2338479 TCTTGCCCGTCAGAGTCTTGACAAAGATCTGCAT 2338512 Score = 82.4 bits (90), Expect = 9e-11 Identities = 135/192 (70%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 || || || || ||||| || | || || || |||| || || ||||| || ||||| Sbjct 2338778 TCTTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCTTCGAGTTGCTTGCCGGCGAAG 2338837 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 43112 || || || || ||||| | || | || |||||| ||| ||| | || | | ||| Sbjct 2338838 ATCAGACGTTGTTGGTCAGGAGGAATGCCCTCCTTATCC-TGAATCTTGGACTTCACGTT 2338896 Query 43113 GCC-ACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | | ||||| ||||| || || | |||||||| ||||| || || ||||| || Sbjct 2338897 GTCGATGGTGTCTGAAGATTCGACCTCAAGGGTGATGGTCTTGCCGGTGAGGGTCTTGAC 2338956 Query 43172 AAAGATTTGCAT 43183 |||||||||||| Sbjct 2338957 AAAGATTTGCAT 2338968 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571817492784200