Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20xenobiotica_20[genbank_20GCA_5F000835505.1_202015-02-23]
15 sequences; 31,405,760 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq5 156 6e-33
>seq5
Length=4013989
Score = 156 bits (172), Expect = 6e-33
Identities = 426/640 (67%), Gaps = 12/640 (2%)
Strand=Plus/Plus
Query 72029 TCATAAAGAGATCAGGAATCCAAAGAGCTATA-AATAGATCTCTGGTTCTATGCTCCTCG 72087
|||| || || |||||| |||| ||||| ||| || ||||| | || | || ||
Sbjct 1356052 TCATGAACAGGTCAGGAGTCCAGAGAGC-ATAGAACAGATCACGGGCACGGACTTCTTCT 1356110
Query 72088 TTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAG 72147
|| || ||||||| | || | | ||| | | || ||||| ||||| || || | |
Sbjct 1356111 TTGCCGTGATTCTTTCTCAGGTTCAAGAAGTCAAAAACATCAGCGTGCCAGGGCTCAAGG 1356170
Query 72148 TATATGGCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTA 72207
|| ||||| | | | || || || ||||| || ||||| || | || | || |||||
Sbjct 1356171 TAGATGGCAAAAGCACCGGGGCGCTTGTTGCCACCCTGGTCAACATAGCGGGCAGTGTTG 1356230
Query 72208 TTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAG 72267
|| | || | | ||| || || | ||||| || | ||||| || |||| || ||
Sbjct 1356231 TTGAAGACACGAAGCATGGGGATGAGGCCATTCGACGTGCCATTAGTGCCGGCAATGTAT 1356290
Query 72268 CTTCCACTGGCACGAAT--ATTGCTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGA 72325
||| |||||||||| | || ||| | | || || || || || | || ||||
Sbjct 1356291 GATCCGGTGGCACGAATGCAGTGAGCATTCAAA--CCGATACCGCCAGCAGTCTTGGAGA 1356348
Query 72326 TTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAA 72385
| | || || || | |||||| ||||| ||||| || || || | |||||| |
Sbjct 1356349 TCATAGCACAAGTCTTCAGCGTATCGTAGATACCCTCAATGCTGTCGGACTTCATGTCGA 1356408
Query 72386 GTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAG 72445
|| || || |||| ||| | || ||||| || || || ||||| || || |
Sbjct 1356409 TCAGGAAGCATGACGACAGTTGAGGTTGAGGTGTTCCGGCGTTGAACAAGGTTGGCGAGG 1356468
Query 72446 CGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAAT-AGCTGATTCTATATCC 72504
| || || || || || | ||||| || | ||||||||||| | || || | | |||
Sbjct 1356469 CATGAGTGAAGCACTTCTGAGACATGAGGTGGTACGTCTCAAGCACCTTAT-CGACATCA 1356527
Query 72505 -CATTGATGTATTCCTACCGCGACACGCATTAACATATGCTGAGGTCTTTCAACGATCTT 72563
|| | || || || || | ||||||||| | ||| || || |||| ||| | | |||
Sbjct 1356528 TCACCG-TGGATGCCCACAGAGACACGCATGAGCATGTGTTGTGGTCGCTCAGCAA-CTT 1356585
Query 72564 G-TTATTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATG 72622
| || || |||| || || ||| ||||||| || || || ||||||||||||||
Sbjct 1356586 GCTTGCCAATCTTCAGCAGATATGATCTTTCCAACGTCTTGAAGCCAAAATAGTTGTAGT 1356645
Query 72623 AAAAGTCTCGTTCGTAAATAATAACCGAATTGAGTTTATC 72662
|||||||| ||||| | || |||| || || | |||
Sbjct 1356646 TGAAGTCTCGGTCGTATACGATGGCCGAGTTCAGCTCATC 1356685
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 671139074161400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |