Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20xenobiotica_20[genbank_20GCA_5F000835505.1_202015-02-23] 15 sequences; 31,405,760 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq10 140 2e-28 seq3 116 2e-21 >seq10 Length=5045 Score = 140 bits (154), Expect = 2e-28 Identities = 88/95 (93%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 1924 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 1983 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 1984 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 2018 >seq3 Length=5039080 Score = 116 bits (128), Expect = 2e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150 ||||||| || | ||| || | ||| || ||| || ||||| || |||||||| || Sbjct 2338514 CCACCTCGCAGTCTCAAGACGAGATGTAGCGTGGATTCTTTTTGGATGTTGTAATCTGAG 2338573 Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210 | | | | || || ||||| ||||| ||||| || | |||||||| |||| ||| Sbjct 2338574 AGAGTTCTGCCATCTTCCAATTGCTTTCCTGCAAAGATCAATCGTTGTTGGTCGGGTGGG 2338633 Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270 | |||||||||||| ||| || ||| || || | || || ||| ||||||| Sbjct 2338634 ATGCCTTCTTTGTCTTGAATCTTGCTCTTTACGTTGTCGATTGTGTCTGAGGATTCAACT 2338693 Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 || | ||| |||||||| ||||| | ||| || ||||| |||||||| Sbjct 2338694 TCGAGTGTGATAGTTTTGCCCGTAAGGGTCTTGACGAAGATCTGCAT 2338740 Score = 98.7 bits (108), Expect = 7e-16 Identities = 150/214 (70%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 38105 CAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTC 38164 |||||||||||| |||||||| |||||||| || ||||| ||||||| ||| | || Sbjct 2338300 CAACACCAAATGGAGAGTGCTTTCCTTTTGGATGTTGTAGTCAGACAGGGTACGGCCATC 2338359 Query 38165 GTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTC 38224 || || || || || ||||| || | || |||||||| | ||||| || || ||||| Sbjct 2338360 CTCCAACTGCTTGCCTGCAAAGATCAATCGCTGTTGATCCGGGGGGATACCCTCCTTGTC 2338419 Query 38225 CATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGT 38284 || || || || || | | ||||| || ||||| || ||||| || Sbjct 2338420 TTGGATCTTCGATTTGACGTTGTCAATGGTATCAGATGACTCGACTTCCAAAGTAATCGT 2338479 Query 38285 TTTACCCGTCAAGGTTTTCACGAATATCTGCATG 38318 || ||||||| || || || || ||||||||| Sbjct 2338480 CTTGCCCGTCAGAGTCTTGACAAAGATCTGCATG 2338513 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334947138767465