Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20xenobiotica_20[genbank_20GCA_5F000835505.1_202015-02-23]
15 sequences; 31,405,760 total letters
Query= NC_008293.1
Length=135454
Score E
Sequences producing significant alignments: (Bits) Value
seq3 125 6e-24
seq6 82.4 7e-11
>seq3
Length=5039080
Score = 125 bits (138), Expect = 6e-24
Identities = 164/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || || || ||||| | || || ||| | |||||| ||||||| || || ||
Sbjct 2338740 ATGCAGATCTTCGTCAAGACCCTTACGGGCAAAACTATCACACTCGAAGTTGAATCCTCA 2338681
Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118
||||| ||||| | ||| || || ||||||||||| || ||||| ||||||
Sbjct 2338680 GACACAATCGACAACGTAAAGAGCAAGATTCAAGACAAAGAAGGCATCCCACCCGACCAA 2338621
Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178
|| || | || ||||| || || ||||| ||||||| | ||| | ||||||||
Sbjct 2338620 CAACGATTGATCTTTGCAGGAAAGCAATTGGAAGATGGCAGAACTCTCTCAGATTACAAC 2338561
Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225
|| ||||||||||||||||||||| | || | || || |||| ||
Sbjct 2338560 ATCCAAAAAGAATCCACGCTACATCTCGTCTTGAGACTGCGAGGTGG 2338514
Score = 109 bits (120), Expect = 5e-19
Identities = 148/204 (73%), Gaps = 2/204 (1%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| ||||| ||||| | ||||| || ||||||| | || || || || ||
Sbjct 2338968 ATGCAAATCTTTGTCAAGACCCTCACCGGCAAGACCATCACCCTTGAGGTCGAATCTTCA 2338909
Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117
||||| ||||| ||||| | || | ||| || || || || ||||| ||||||||
Sbjct 2338908 GACACCATCGACAACGTGAAGTCCAAGATTCAG-GATAAGGAGGGCATTCCTCCTGACCA 2338850
Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177
||| || | || || |||||||| ||| | ||||| | ||||| | ||| |||||
Sbjct 2338849 ACAACGTCTGATCTTCGCCGGCAAGCAACTCGAAGACGGCCGCACCCTCTCCGACTACAA 2338790
Query 25178 TATTCAAAAAGAATCCACGCTACA 25201
|| || ||||||||||| || ||
Sbjct 2338789 CATCCAGAAAGAATCCACTCTCCA 2338766
>seq6
Length=3773453
Score = 82.4 bits (90), Expect = 7e-11
Identities = 84/110 (76%), Gaps = 0/110 (0%)
Strand=Plus/Plus
Query 25092 GACAAAGAAGGGATTCCACCTGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAA 25151
||||| ||||| ||||| ||||||||||| || | || || |||||||| ||| | |||
Sbjct 232444 GACAAGGAAGGAATTCCTCCTGACCAACAACGTCTGATCTTCGCCGGCAAGCAACTCGAA 232503
Query 25152 GATGATCGCACTGTGGGCGATTACAATATTCAAAAAGAATCCACGCTACA 25201
|||| |||||| | ||| ||||| ||||| || || || || || ||
Sbjct 232504 GATGGCCGCACTCTTTCCGACTACAACATTCAGAAGGAGTCGACCCTCCA 232553
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433327920782225
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |