Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20xenobiotica_20[genbank_20GCA_5F000835505.1_202015-02-23] 15 sequences; 31,405,760 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq4 140 2e-27 seq2 87.8 1e-11 >seq4 Length=4110281 Score = 140 bits (154), Expect = 2e-27 Identities = 420/640 (66%), Gaps = 10/640 (2%) Strand=Plus/Plus Query 518015 ACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACT 518074 || |||||||| || || || ||||| ||||| | ||||| || | || | | ||| Sbjct 1119882 ACCAGACGATTGTCGAAGTCCTCACCACCCAAGTGAGTATCACCAGCGGTCGACTTGACT 1119941 Query 518075 TGGAAAAGTCCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCA 518134 | || | || ||||| | | ||| || | ||||| ||| |||||||| | ||| Sbjct 1119942 TCAAAGATACCCTCTTCGATGGTCAAGAGGGAGACATCGAAGGTACCACCACCAAGATCG 1120001 Query 518135 AAAATAAGTACATTCATTTCTTTGTCT-TGGTTTT--TATCAAGACCATACGCAAAAGCA 518191 || || || ||||| || | | |||| || ||||||||||||| |||| ||| Sbjct 1120002 AAGATGAGGACATTGCGCTC---GCCAGTGGTCTTCTTATCAAGACCATAGGCAATGGCA 1120058 Query 518192 GCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCT 518251 || || || ||||| || || || | | || || ||||| ||||| || || ||| Sbjct 1120059 GCTGCGGTGGGTTCGTTGATGATACGGAGGACGTTGAGACCGGCAATGAGGCCGGCGTCT 1120118 Query 518252 TTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTT 518311 || || || |||||||| ||||| || || ||||| || || | ||||| | | Sbjct 1120119 TTTGTCGCCTGTCTTTGACTGTCGTTGAAGTAGGCAGGGACTGTGACGACGGCGTTGTTG 1120178 Query 518312 ACTTCTTTACCAATATAAGCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAA 518371 || || | ||| | || || | | |||| || | || | ||| || || Sbjct 1120179 ACAGTGCCGCCGAGATATGATTCAGCGGTCTCTCTCATCTTTGTCAAGACCATCGAGGAG 1120238 Query 518372 ATTTGTTCTGGGGAATATTGCTTGGATTC-ATTTTGATATGATACTTCAAAATATGGTTT 518430 || | |||||| | |||| || | ||| |||| || ||||||| |||||| Sbjct 1120239 ATCTCTTCTGGTGTGAATTGTTTTGTTTCGCCCTTGA-ATTCGACTTCAATGACTGGTTT 1120297 Query 518431 ATTACCAACATTAATAACTTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTGG-T 518489 || | || || || || || | | ||||| || | ||||| || || | Sbjct 1120298 GCCGCCCTTGTCGATGACCTTGAAGGGGAAATGCTTCATGTCAGCCTGAAC-CTCAGGAT 1120356 Query 518490 CATTAAAATCTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTG 518549 || | || | | ||||| ||||| || || || |||| ||| |||| || || || | Sbjct 1120357 CACTGAATTTCCGGCCAATCAATCGCTTGGCGTCGAAAACAGTGTTGGCAGGGTTCATAG 1120416 Query 518550 CAGCTTGATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATG 518609 | |||| | || || ||||| ||||| ||| | || || ||||| || | || | | Sbjct 1120417 CGACTTGGTTCTTTGCAGCATCACCAATGAGACGCTCGGTGTCTGTGAAGGCCACGAAGG 1120476 Query 518610 ATGGAGTTGTGCGATTACCTTGATCATTCGCAATAATTTC 518649 | |||||||| || || ||||| ||||| ||||| ||||| Sbjct 1120477 AGGGAGTTGTTCGGTTGCCTTGGTCATTGGCAATGATTTC 1120516 >seq2 Length=5198131 Score = 87.8 bits (96), Expect = 1e-11 Identities = 234/357 (66%), Gaps = 3/357 (1%) Strand=Plus/Minus Query 518026 ATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCC 518085 ||| ||||||||||| || | | ||||| || | || || || | ||||| || Sbjct 3905883 ATCGAAATCTTCACCACCGAGATGAGTATCACCGGCAGTGGCCAAGACCTCGAAAACGCC 3905824 Query 518086 ATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTAC 518145 |||||||| || | || | ||||| || || ||||| | ||| | | | | Sbjct 3905823 ATCTTCAATTGAAAGGAGGGAGACATCGAAAGTACCGCCACCAAGATCGTAGACGATGAT 3905764 Query 518146 ATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTC 518205 | | |||||| | | | || || || || || || | |||||||| |||||||| Sbjct 3905763 TTGGCTCTCTTTGCCCT---TCTTGTCGAGTCCGTAGGCGATGGCAGCAGCCGTTGGTTC 3905707 Query 518206 ATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCT 518265 ||| | | | | ||| | |||||||| || | || || ||||| || |||||||| Sbjct 3905706 ATTGACCACACGGAGAACCGTCAGACCAGCGATCGTCCCAGCGTCTTTTGTTGCTTGTCT 3905647 Query 518266 TTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAAT 518325 || | |||||| || || || || || || | |||||||| || |||| || || | Sbjct 3905646 CTGGGCATCGTTGAAGTAGGCCGGCACCGTGACAACGGCATGGGTAACTTTCTTGCCCAA 3905587 Query 518326 ATAAGCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGG 518382 || || ||| || ||||| || | || | ||| | ||||||| ||| || Sbjct 3905586 GTATGCTTCTGCGACTTCCTTCATCTTGCCCAATACCATGGCGGAAATTTCTTCGGG 3905530 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780821655650590