Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20xenobiotica_20[genbank_20GCA_5F000835505.1_202015-02-23] 15 sequences; 31,405,760 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq5 123 3e-23 >seq5 Length=4013989 Score = 123 bits (136), Expect = 3e-23 Identities = 358/544 (66%), Gaps = 8/544 (1%) Strand=Plus/Plus Query 48263 TTCTTCATTGCCACTATTCCTTTTAAG-TTCAAGAAAGTCCATTATATCAGCATGCCATG 48321 |||||| ||||| |||| || | || |||||||| ||| | | |||||| ||||| | Sbjct 1356104 TTCTTCTTTGCCGTGATTCTTTCTCAGGTTCAAGAA-GTCAAAAACATCAGCGTGCCAGG 1356162 Query 48322 GTTCTAAATATATTGCCATTACACCTGGTCGTTTATTACCTCCTTGATCTATATATCTGG 48381 | || | || || || | |||| || || || || || || || || | ||| | || Sbjct 1356163 GCTCAAGGTAGATGGCAAAAGCACCGGGGCGCTTGTTGCCACCCTGGTCAACATAGCGGG 1356222 Query 48382 CAGTATTGTTATAAACTCTTAACATTGGGACAATACCATTTGATATACCATTGGTTCCCG 48441 |||| ||||| | || | | ||| |||| | ||||| || | ||||| || || | Sbjct 1356223 CAGTGTTGTTGAAGACACGAAGCATGGGGATGAGGCCATTCGACGTGCCATTAGTGCCGG 1356282 Query 48442 AAATATAACTTCCACTAGCTCTTAT--ATTACTAATTGAAATACCTATACCACCTGCCAT 48499 ||| || ||| | || | || | | ||| ||| || ||||| || || | Sbjct 1356283 CAATGTATGATCCGGTGGCACGAATGCAGTGAGCATTCAAA--CCGATACCGCCAGCAGT 1356340 Query 48500 TTTAGATATTAGAGCACACCGTTTAAGGGTATCATAAATTCCTTCTATACTATCATCTAT 48559 || || || | |||||| || || ||||| || || || || || || || | Sbjct 1356341 CTTGGAGATCATAGCACAAGTCTTCAGCGTATCGTAGATACCCTCAATGCTGTCGGACTT 1356400 Query 48560 CATATTTAATAGAAAACAACTAGACATTTGCGGATGACAAGTTCCTGAATTAAATAATGT 48619 ||| | | || || || |||| ||| || ||| ||||| | || || || || Sbjct 1356401 CATGTCGATCAGGAAGCATGACGACAGTTGAGGTTGAGGTGTTCCGGCGTTGAACAAGGT 1356460 Query 48620 TGGAGATGCATGAATAAACCATTTCTCTGATAACAATTTATATGTTTCAATAACAGAATC 48679 ||| || |||||| | || || |||| || | | | || || |||| || ||| Sbjct 1356461 TGGCGAGGCATGAGTGAAGCACTTCTGAGACATGAGGTGGTACGTCTCAAGCACCTTATC 1356520 Query 48680 TATATCC-CATTGATGTATACCTATAGATACACGCATTAACATATATTGAGGTCTTTCAA 48738 | ||| || | || || || | ||| |||||||| | ||| | ||| |||| ||| Sbjct 1356521 GACATCATCACCG-TGGATGCCCACAGAGACACGCATGAGCATGTGTTGTGGTCGCTCAG 1356579 Query 48739 CAATTTTGTTATTTATTTTCAAAAGATATGATTTTTCCAATGTTTTAAAACCAAAATAGT 48798 ||| || || || |||| ||||||||| ||||||| || || || |||||||||| Sbjct 1356580 CAACTTGCTTGCCAATCTTCAGCAGATATGATCTTTCCAACGTCTTGAAGCCAAAATAGT 1356639 Query 48799 TGTA 48802 |||| Sbjct 1356640 TGTA 1356643 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562108694604600