Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20xenobiotica_20[genbank_20GCA_5F000835505.1_202015-02-23] 15 sequences; 31,405,760 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq4 165 5e-35 seq3 96.9 2e-14 seq7 91.5 1e-12 seq6 86.0 4e-11 >seq4 Length=4110281 Score = 165 bits (182), Expect = 5e-35 Identities = 330/487 (68%), Gaps = 4/487 (1%) Strand=Plus/Minus Query 474392 GAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACTGAA 474451 ||||| ||||||||||||||||| || ||||||| || || | || | || || || Sbjct 1120516 GAAATCATTGCCAATGACCAAGGCAACCGAACAACTCCCTCCTTCGTGGCCTTCACAGAC 1120457 Query 474452 ACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAATACT 474511 || || | ||| ||||| |||||||| || | |||| || || |||| || ||| Sbjct 1120456 ACCGAGCGTCTCATTGGTGATGCTGCAAAGAACCAAGTCGCTATGAACCCTGCCAACACT 1120397 Query 474512 ATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCTGAT 474571 |||| || || || |||||||||| || || || |||| | || || |||| Sbjct 1120396 GTTTTCGACGCCAAGCGATTGATTGGCCGGAAATTCAGTGATCCTGAGGTTCAGGCTGAC 1120337 Query 474572 ATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGAAG--CAA 474629 ||| |||| || || ||||| || | || || |||||| || |||| || Sbjct 1120336 ATGAAGCATTTCCCCTTCAAGGTCATCGACAAGGGCGGCAAACCAGTCATTGAAGTCGAA 1120277 Query 474630 TACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTAGCCA 474689 | || | || ||||| |||||||| |||| ||| | || || || ||||| || | | Sbjct 1120276 TTCAAG--GGCGAAACAAAACAATTCACACCAGAAGAGATCTCCTCGATGGTCTTGACAA 1120219 Query 474690 AAATGAAACAAACCGCGAGCTCATATCTTGGACAAGAAGTAACTGATGCAGTAATTACTG 474749 | |||| | | ||||| |||||||| || || | | || || | || | Sbjct 1120218 AGATGAGAGAGACCGCTGAATCATATCTCGGCGGCACTGTCAACAACGCCGTCGTCACAG 1120159 Query 474750 TTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTGCAG 474809 | || || || || || || |||| | || || || ||||| || || ||||| | Sbjct 1120158 TCCCTGCCTACTTCAACGACAGTCAAAGACAGGCGACAAAAGACGCCGGCCTCATTGCCG 1120099 Query 474810 GTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGTCTTG 474869 |||| || || | ||||| || || ||||| || ||||| || |||| |||||||||| Sbjct 1120098 GTCTCAACGTCCTCCGTATCATCAACGAACCCACCGCAGCTGCCATTGCCTATGGTCTTG 1120039 Query 474870 ATAAGAA 474876 ||||||| Sbjct 1120038 ATAAGAA 1120032 >seq3 Length=5039080 Score = 96.9 bits (106), Expect = 2e-14 Identities = 127/176 (72%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 480594 TTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGT 480653 || ||||| | ||||||||| |||||| | ||||||||| ||||| || | |||||| Sbjct 2338562 TTGTAATCTGAGAGAGTTCTGCCATCTTCCAATTGCTTTCCTGCAAAGATCAATCGTTGT 2338621 Query 480654 TGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCA 480713 || || || || || ||||| |||||||||||||| || || || || || || Sbjct 2338622 TGGTCGGGTGGGATGCCTTCTTTGTCTTGAATCTTGCTCTTTACGTTGTCGATTGTGTCT 2338681 Query 480714 GTGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | | | | ||| || || |||||||| || || || ||||| ||||| || || Sbjct 2338682 GAGGATTCAACTTCGAGTGTGATAGTTTTGCCCGTAAGGGTCTTGACGAAGATCTG 2338737 Score = 96.9 bits (106), Expect = 2e-14 Identities = 156/225 (69%), Gaps = 12/225 (5%) Strand=Plus/Plus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||| |||||||| ||||| || || || |||||| | || || || | || || Sbjct 2338747 ACGGAGACGGAGAACAAGGTGGAGAGTGGATTCTTTCTGGATGTTGTAGTCGGAGAGGGT 2338806 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | | ||||| |||||||| || || || || ||||||||||| ||||||||||| || Sbjct 2338807 GCGGCCGTCTTCGAGTTGCTTGCCGGCGAAGATCAGACGTTGTTGGTCAGGAGGAATGCC 2338866 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTT----- 480725 ||||| || |||||||| || || || || |||| ||||| | Sbjct 2338867 CTCCTTATCCTGAATCTTGGACTTCACGTTGTCGAT------GGTGTCTGAAGATTCGAC 2338920 Query 480726 -TCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 |||||||| || || || |||||||| ||||| || || ||||| Sbjct 2338921 CTCAAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACAAAGATTTG 2338965 >seq7 Length=3649802 Score = 91.5 bits (100), Expect = 1e-12 Identities = 117/159 (74%), Gaps = 2/159 (1%) Strand=Plus/Plus Query 480606 AGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGA 480665 || |||| | ||| || ||||||||||| || ||||| | || |||||||| ||||| Sbjct 2466079 AGGGTTCGGCCATCCTCGAGTTGCTTTCCGGCGAAAATCAATCGCTGTTGATCGGGAGGG 2466138 Query 480666 ATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGT 480724 ||||||||||||||||| ||||| ||||| || || || || | || | | Sbjct 2466139 ATTCCTTCCTTGTCTTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGATGACTCCA-C 2466197 Query 480725 TTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAA 480763 |||||||| || || || || ||||| ||||| ||||| Sbjct 2466198 CTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAA 2466236 >seq6 Length=3773453 Score = 86.0 bits (94), Expect = 4e-11 Identities = 64/75 (85%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 480606 AGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGA 480665 ||||| | | |||||| |||||||| || || || || ||||||||||| ||||||||| Sbjct 232517 AGAGTGCGGCCATCTTCGAGTTGCTTGCCGGCGAAGATCAGACGTTGTTGGTCAGGAGGA 232458 Query 480666 ATTCCTTCCTTGTCT 480680 ||||||||||||||| Sbjct 232457 ATTCCTTCCTTGTCT 232443 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268178556577220