Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20xenobiotica_20[genbank_20GCA_5F000835505.1_202015-02-23] 15 sequences; 31,405,760 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq4 143 2e-28 seq2 91.5 1e-12 >seq4 Length=4110281 Score = 143 bits (158), Expect = 2e-28 Identities = 423/641 (66%), Gaps = 12/641 (2%) Strand=Plus/Plus Query 282182 ACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACT 282241 || |||||||| || || || ||||| ||||| | ||||| || | || | | ||| Sbjct 1119882 ACCAGACGATTGTCGAAGTCCTCACCACCCAAGTGAGTATCACCAGCGGTCGACTTGACT 1119941 Query 282242 TGGAAAAGTCCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCA 282301 | || | || ||||| | | ||| || | ||||| ||| |||||||| | ||| Sbjct 1119942 TCAAAGATACCCTCTTCGATGGTCAAGAGGGAGACATCGAAGGTACCACCACCAAGATCG 1120001 Query 282302 AAAATAAGTACATTCATTTCTTTGTCT-TGGTTTT--TATCAAGACCATACGCAAAAGCA 282358 || || || ||||| || | | |||| || ||||||||||||| |||| ||| Sbjct 1120002 AAGATGAGGACATTGCGCTC---GCCAGTGGTCTTCTTATCAAGACCATAGGCAATGGCA 1120058 Query 282359 GCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCT 282418 || || || ||||| || || || | | || || ||||| ||||| || || ||| Sbjct 1120059 GCTGCGGTGGGTTCGTTGATGATACGGAGGACGTTGAGACCGGCAATGAGGCCGGCGTCT 1120118 Query 282419 TTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTT 282478 || || || |||||||| ||||| || || ||||| || || | ||||| | |||| Sbjct 1120119 TTTGTCGCCTGTCTTTGACTGTCGTTGAAGTAGGCAGGGACTGTGACGACGGCGT-TGTT 1120177 Query 282479 -ACTTCTTTTCCAATATAAGCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGA 282537 || || | ||| | || || | | |||| || | || | ||| || || Sbjct 1120178 GACAGTGCCGCCGAGATATGATTCAGCGGTCTCTCTCATCTTTGTCAAGACCATCGAGGA 1120237 Query 282538 AATTTGTTCTGGAGAATATTGCTTGGATTC-ATTTTGATATGATACTTCAAAATATGGTT 282596 || | |||||| | |||| || | ||| |||| || ||||||| ||||| Sbjct 1120238 GATCTCTTCTGGTGTGAATTGTTTTGTTTCGCCCTTGA-ATTCGACTTCAATGACTGGTT 1120296 Query 282597 TATTACCAACATTAATAACTTTAAATGGCCAATATTTCATATCTGATTGAACACTTTGG- 282655 | || | || || || || || ||| ||||| || | ||||| || || Sbjct 1120297 TGCCGCCCTTGTCGATGACCTTGAAGGGGAAATGCTTCATGTCAGCCTGAAC-CTCAGGA 1120355 Query 282656 TCATTAAAATCTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACT 282715 ||| | || | | ||||| ||||| || || || |||| ||| |||| || || | Sbjct 1120356 TCACTGAATTTCCGGCCAATCAATCGCTTGGCGTCGAAAACAGTGTTGGCAGGGTTCATA 1120415 Query 282716 GCAGCTTGATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATAT 282775 || |||| | || || ||||| ||||| ||| | || || ||||| || | || | Sbjct 1120416 GCGACTTGGTTCTTTGCAGCATCACCAATGAGACGCTCGGTGTCTGTGAAGGCCACGAAG 1120475 Query 282776 GATGGAGTTGTGCGATTACCTTGATCATTCGCAATAATTTC 282816 || |||||||| || || ||||| ||||| ||||| ||||| Sbjct 1120476 GAGGGAGTTGTTCGGTTGCCTTGGTCATTGGCAATGATTTC 1120516 >seq2 Length=5198131 Score = 91.5 bits (100), Expect = 1e-12 Identities = 236/359 (66%), Gaps = 3/359 (1%) Strand=Plus/Minus Query 282193 ATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCC 282252 ||| ||||||||||| || | | ||||| || | || || || | ||||| || Sbjct 3905883 ATCGAAATCTTCACCACCGAGATGAGTATCACCGGCAGTGGCCAAGACCTCGAAAACGCC 3905824 Query 282253 ATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTAC 282312 |||||||| || | || | ||||| || || ||||| | ||| | | | | Sbjct 3905823 ATCTTCAATTGAAAGGAGGGAGACATCGAAAGTACCGCCACCAAGATCGTAGACGATGAT 3905764 Query 282313 ATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTC 282372 | | |||||| | | | || || || || || || | |||||||| |||||||| Sbjct 3905763 TTGGCTCTCTTTGCCCT---TCTTGTCGAGTCCGTAGGCGATGGCAGCAGCCGTTGGTTC 3905707 Query 282373 ATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCT 282432 ||| | | | | ||| | |||||||| || | || || ||||| || |||||||| Sbjct 3905706 ATTGACCACACGGAGAACCGTCAGACCAGCGATCGTCCCAGCGTCTTTTGTTGCTTGTCT 3905647 Query 282433 TTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAAT 282492 || | |||||| || || || || || || | |||||||| || |||| || || | Sbjct 3905646 CTGGGCATCGTTGAAGTAGGCCGGCACCGTGACAACGGCATGGGTAACTTTCTTGCCCAA 3905587 Query 282493 ATAAGCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGAG 282551 || || ||| || ||||| || | || | ||| | ||||||| ||| |||| Sbjct 3905586 GTATGCTTCTGCGACTTCCTTCATCTTGCCCAATACCATGGCGGAAATTTCTTCGGGAG 3905528 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740629663563390