Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20xenobiotica_20[genbank_20GCA_5F000835505.1_202015-02-23] 15 sequences; 31,405,760 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq3 109 5e-19 seq5 98.7 8e-16 >seq3 Length=5039080 Score = 109 bits (120), Expect = 5e-19 Identities = 143/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 || || ||||| || || ||||||||| | | |||| |||||||||| || || ||| Sbjct 2338772 GTGGATTCTTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCTTCGAGTTGCTTGCCG 2338831 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 ||| | || ||||| ||||| || || || | ||||| ||||| |||||| ||| Sbjct 2338832 GCGAAGATCAGACGTTGTTGGTCAGGAGGAATGCCCTCCTTATCCTGAATCTTGGACTTC 2338891 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | | || | ||||||| | ||| || || || || || | ||||| || || || Sbjct 2338892 ACGTTGTCGATGGTGTCTGAAGATTCGACCTCAAGGGTGATGGTCTTGCCGGTGAGGGTC 2338951 Query 27231 TTCACAAAGATTTGCATA 27248 || ||||||||||||||| Sbjct 2338952 TTGACAAAGATTTGCATA 2338969 Score = 95.1 bits (104), Expect = 1e-14 Identities = 132/185 (71%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 ||||| || || || || || || ||||| ||||||||||||| |||| | ||||| Sbjct 2338988 ACCAAGTGCAAGGTCGACTCCTTCTGAATGTTGTAGTCGCTCAGAGTGCGGCCATCTTCA 2339047 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 ||||| ||||| ||| | ||||| ||||||||||| || || | || || || || | Sbjct 2339048 AGCTGCTTACCAGCGAAGATGAGGCGCTGTTGATCGGGGGGAATGCCTTCCTTGTCCTGG 2339107 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 |||||| |||| | | || | || || ||| ||| || || || || || | ||| Sbjct 2339108 ATCTTGGACTTCACGTTGTCGATGGTATCGCTGGATTCGACCTCAAGGGTGATGGTCTTG 2339167 Query 27219 CCCGT 27223 || || Sbjct 2339168 CCGGT 2339172 Score = 87.8 bits (96), Expect = 2e-12 Identities = 147/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 27035 CAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTC 27094 ||| |||||||| | || || ||||| || |||||||| || | | || | || Sbjct 2338300 CAACACCAAATGGAGAGTGCTTTCCTTTTGGATGTTGTAGTCAGACAGGGTACGGCCATC 2338359 Query 27095 TTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATC 27154 || | ||| || || || | || | |||||||||||||| || | |||||| || || Sbjct 2338360 CTCCAACTGCTTGCCTGCAAAGATCAATCGCTGTTGATCCGGGGGGATACCCTCCTTGTC 2338419 Query 27155 GGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGA 27214 |||||| ||| | | | || | || || | | || ||||| | ||| || | Sbjct 2338420 TTGGATCTTCGATTTGACGTTGTCAATGGTATCAGATGACTCGACTTCCAAAGTAATCGT 2338479 Query 27215 TTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 |||||||||||||| || |||||||| ||||| Sbjct 2338480 CTTGCCCGTCAGAGTCTTGACAAAGATCTGCAT 2338512 >seq5 Length=4013989 Score = 98.7 bits (108), Expect = 8e-16 Identities = 160/230 (70%), Gaps = 3/230 (1%) Strand=Plus/Plus Query 130753 ATTAATGATTTGAAAATCACCAGCCAGGACGCGTCTAACGTAAATGTTGCTCGTGAACGG 130812 ||| | |||||| || || ||||||| ||| |||| | ||| ||||| |||| | || Sbjct 1355153 ATTGACGATTTGGAATTCGCCAGCCAAGACACGTCGAGAGTAGATGTTTGACGTGTATGG 1355212 Query 130813 TTCAAAGGATTCGTTGTTGCCGAATATTTGTGCTGTAGTTGCGGTGGGCATGTATGCCAC 130872 || ||| |||||||||| || || || || | ||| | ||| ||||||||| || || Sbjct 1355213 CTCGAAGCATTCGTTGTTACCCAAGATCTGAGATGTGGATGCAGTGGGCATGGGAGCAAC 1355272 Query 130873 TAATAGAGAATTACGAAGACCGTGCGTCGTGATTTTTCGCTTCAATTCATCCCAATCCCA 130932 | ||||| || || | ||| ||| | | |||| ||||| ||||| ||||| Sbjct 1355273 AAGAAGAGAGTTGCGGACACCATGCTTTGCAATTTCAGCCTTCAGGCTGTCCCAGTCCCA 1355332 Query 130933 TAGAGAGGTAGGTTTGACATTGTTCCACATATCAAATTGTAGTATGCCTT 130982 || || || | ||||| |||||||||| |||| || | ||||| Sbjct 1355333 CAGGTCTGTCGGAGTAACATT---CCACATATCATATTGAAGGACGCCTT 1355379 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424934322316680