Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20xenobiotica_20[genbank_20GCA_5F000835505.1_202015-02-23] 15 sequences; 31,405,760 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq3 188 2e-42 seq7 129 1e-24 seq6 125 2e-23 seq5 84.2 5e-11 >seq3 Length=5039080 Score = 188 bits (208), Expect = 2e-42 Identities = 169/212 (80%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || |||||||| |||||||| ||||| |||||||| || || | ||||| | || ||| Sbjct 2338757 AGAACAAGGTGGAGAGTGGATTCTTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCT 2338816 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || || |||||||| |||||||| || ||||||||||||||||||| || ||||| ||| Sbjct 2338817 TCGAGTTGCTTGCCGGCGAAGATCAGACGTTGTTGGTCAGGAGGAATGCCCTCCTTATCC 2338876 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || ||||| |||||||| ||||||||||| || ||| ||||| || ||||| ||| Sbjct 2338877 TGAATCTTGGACTTCACGTTGTCGATGGTGTCTGAAGATTCGACCTCAAGGGTGATGGTC 2338936 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || ||||| ||||| ||||| | ||||| Sbjct 2338937 TTGCCGGTGAGGGTCTTGACAAAGATTTGCAT 2338968 Score = 168 bits (186), Expect = 2e-36 Identities = 170/221 (77%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953 || ||||| | ||| || || || ||||| |||||||||||||| ||||| | || || Sbjct 2338520 CGCAGTCTCAAGACGAGATGTAGCGTGGATTCTTTTTGGATGTTGTAATCTGAGAGAGTT 2338579 Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013 || |||||||||| ||||| ||||| ||||| | ||||||||||| || || | ||| Sbjct 2338580 CTGCCATCTTCCAATTGCTTTCCTGCAAAGATCAATCGTTGTTGGTCGGGTGGGATGCCT 2338639 Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGA 211073 || ||||| || ||||| || ||||| ||||| ||||| ||| |||||| ||||| Sbjct 2338640 TCTTTGTCTTGAATCTTGCTCTTTACGTTGTCGATTGTGTCTGAGGATTCAACTTCGAGT 2338699 Query 211074 GTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| || || ||||| || ||||| || || | |||||| Sbjct 2338700 GTGATAGTTTTGCCCGTAAGGGTCTTGACGAAGATCTGCAT 2338740 Score = 152 bits (168), Expect = 1e-31 Identities = 167/222 (75%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 ||||||||| | || | || |||||| || ||||||||||| || || | ||||| Sbjct 2338291 ACGAAGTCTCAACACCAAATGGAGAGTGCTTTCCTTTTGGATGTTGTAGTCAGACAGGGT 2338350 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | ||||| |||| |||||||||||| ||||| | || ||||| || || || | || Sbjct 2338351 ACGGCCATCCTCCAACTGCTTGCCTGCAAAGATCAATCGCTGTTGATCCGGGGGGATACC 2338410 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 |||||||| |||||||| ||| ||||| || ||||| ||||| || || || | Sbjct 2338411 CTCCTTGTCTTGGATCTTCGATTTGACGTTGTCAATGGTATCAGATGACTCGACTTCCAA 2338470 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||| |||||||| ||||| |||||||| ||||| | |||||| Sbjct 2338471 AGTAATCGTCTTGCCCGTCAGAGTCTTGACAAAGATCTGCAT 2338512 Score = 136 bits (150), Expect = 9e-27 Identities = 150/200 (75%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 |||||| | || || | ||| | || ||||| || || ||||| || || || || Sbjct 2338975 ACGAAGACGAAGAACCAAGTGCAAGGTCGACTCCTTCTGAATGTTGTAGTCGCTCAGAGT 2339034 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | |||||||| |||||||| || |||||||| ||||| ||||| || || |||| || Sbjct 2339035 GCGGCCATCTTCAAGCTGCTTACCAGCGAAGATGAGGCGCTGTTGATCGGGGGGAATGCC 2339094 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 |||||||||||||||||| |||||||| |||||||| || | ||| ||||| || Sbjct 2339095 TTCCTTGTCCTGGATCTTGGACTTCACGTTGTCGATGGTATCGCTGGATTCGACCTCAAG 2339154 Query 211073 AGTGATCGTCTTTCCCGTGA 211092 ||||| ||||| || |||| Sbjct 2339155 GGTGATGGTCTTGCCGGTGA 2339174 >seq7 Length=3649802 Score = 129 bits (142), Expect = 1e-24 Identities = 136/179 (76%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 210927 TTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATA 210986 ||||||||||| || || ||||| | ||||| || || ||||| || ||||| || Sbjct 2466058 TTTTGGATGTTGTAGTCGCTCAGGGTTCGGCCATCCTCGAGTTGCTTTCCGGCGAAAATC 2466117 Query 210987 AGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCG 211046 | || ||||| || ||||| | |||||||||||| |||||||| || ||||| ||| Sbjct 2466118 AATCGCTGTTGATCGGGAGGGATTCCTTCCTTGTCTTGGATCTTGGACTTGACGTTGTCG 2466177 Query 211047 ATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAA 211105 |||||||| || || ||||| || ||||| ||||| |||||||| ||||| || || Sbjct 2466178 ATGGTGTCGGATGACTCCACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAA 2466236 >seq6 Length=3773453 Score = 125 bits (138), Expect = 2e-23 Identities = 105/129 (81%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 ||| |||| ||||| ||||| || || ||||| || || ||||| || || | ||| || Sbjct 232572 ACGGAGTCGGAGGACGAGGTGGAGGGTCGACTCCTTCTGAATGTTGTAGTCGGAAAGAGT 232513 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | |||||||| || |||||||| |||||||| || ||||||||||||||||||| ||| Sbjct 232512 GCGGCCATCTTCGAGTTGCTTGCCGGCGAAGATCAGACGTTGTTGGTCAGGAGGAATTCC 232453 Query 211013 TTCCTTGTC 211021 ||||||||| Sbjct 232452 TTCCTTGTC 232444 >seq5 Length=4013989 Score = 84.2 bits (92), Expect = 5e-11 Identities = 96/129 (74%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 178237 GTAGAGCTCCTCGAATTCCGGTCCATAGACATCATCGAGACCGGGAGCCTCATTGGGGCA 178296 |||||| |||| || ||| |||||||||||| | ||||| || ||||||| ||||| Sbjct 1355957 GTAGAGAGCCTCAAACTCCTCGCCATAGACATCAGCAAGACCCGGTGCCTCATGAGGGCA 1356016 Query 178297 GAAGAGACTCCACTGACCGTCTTCCTTCACTCGTTTCATGAAGAGGTCAGAGGTCCAGAT 178356 |||||| |||| | || | || || || ||||||| ||||||| ||||||| Sbjct 1356017 GAAGAGGGTCCAGTCTTGGTTCTTCTCGACGCGGCTCATGAACAGGTCAGGAGTCCAGAG 1356076 Query 178357 GGCATAGAA 178365 |||||||| Sbjct 1356077 AGCATAGAA 1356085 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159151777225475